Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y76

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Y76 entry

There are 6 chains in PDB entry 7Y76 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER 11	LEU 583
A	SER 19	ARG 768
E	THR 333	SER 530
D	SER 11	LEU 583
C	SER 19	ARG 768
F	THR 333	SER 530

There are144 helices in PDB entry 7Y76. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	12	23	Right-handed alpha
Helix 2	AA2	B	29	38	Right-handed alpha
Helix 3	AA3	B	40	55	Right-handed alpha
Helix 4	AA4	B	55	70	Right-handed alpha
Helix 5	AA5	B	72	81	Right-handed alpha
Helix 6	AA6	B	82	84	Right-handed 310
Helix 7	AA7	B	85	115	Right-handed alpha
Helix 8	AA8	B	121	125	Right-handed 310
Helix 9	AA9	B	137	142	Right-handed alpha
Helix 10	AB1	B	145	151	Right-handed alpha
Helix 11	AB2	B	168	187	Right-handed alpha
Helix 12	AB3	B	195	216	Right-handed alpha
Helix 13	AB4	B	220	229	Right-handed alpha
Helix 14	AB5	B	237	252	Right-handed alpha
Helix 15	AB6	B	257	263	Right-handed alpha
Helix 16	AB7	B	271	321	Right-handed alpha
Helix 17	AB8	B	332	340	Right-handed alpha
Helix 18	AB9	B	344	349	Right-handed alpha
Helix 19	AC1	B	351	355	Right-handed 310
Helix 20	AC2	B	359	366	Right-handed alpha
Helix 21	AC3	B	372	383	Right-handed alpha
Helix 22	AC4	B	388	420	Right-handed alpha
Helix 23	AC5	B	423	427	Right-handed 310
Helix 24	AC6	B	429	446	Right-handed alpha
Helix 25	AC7	B	447	450	Right-handed 310
Helix 26	AC8	B	452	483	Right-handed alpha
Helix 27	AC9	B	485	498	Right-handed alpha
Helix 28	AD1	B	502	509	Right-handed alpha
Helix 29	AD2	B	512	528	Right-handed alpha
Helix 30	AD3	B	552	568	Right-handed alpha
Helix 31	AD4	B	569	580	Right-handed alpha
Helix 32	AD5	A	21	53	Right-handed alpha
Helix 33	AD6	A	56	81	Right-handed alpha
Helix 34	AD7	A	84	88	Right-handed 310
Helix 35	AD8	A	90	102	Right-handed alpha
Helix 36	AD9	A	109	130	Right-handed alpha
Helix 37	AE1	A	147	155	Right-handed alpha
Helix 38	AE2	A	157	172	Right-handed alpha
Helix 39	AE3	A	172	193	Right-handed alpha
Helix 40	AE4	A	198	205	Right-handed alpha
Helix 41	AE5	A	220	230	Right-handed alpha
Helix 42	AE6	A	233	249	Right-handed alpha
Helix 43	AE7	A	265	267	Right-handed 310
Helix 44	AE8	A	278	283	Right-handed alpha
Helix 45	AE9	A	293	300	Right-handed alpha
Helix 46	AF1	A	303	318	Right-handed alpha
Helix 47	AF2	A	326	331	Right-handed alpha
Helix 48	AF3	A	366	383	Right-handed alpha
Helix 49	AF4	A	384	388	Right-handed 310
Helix 50	AF5	A	389	393	Right-handed 310
Helix 51	AF6	A	399	412	Right-handed alpha
Helix 52	AF7	A	414	422	Right-handed alpha
Helix 53	AF8	A	431	444	Right-handed alpha
Helix 54	AF9	A	446	448	Right-handed 310
Helix 55	AG1	A	449	466	Right-handed alpha
Helix 56	AG2	A	472	484	Right-handed alpha
Helix 57	AG3	A	499	502	Right-handed 310
Helix 58	AG4	A	503	508	Right-handed alpha
Helix 59	AG5	A	513	533	Right-handed alpha
Helix 60	AG6	A	538	542	Right-handed 310
Helix 61	AG7	A	547	559	Right-handed alpha
Helix 62	AG8	A	565	574	Right-handed alpha
Helix 63	AG9	A	581	588	Right-handed alpha
Helix 64	AH1	A	588	599	Right-handed alpha
Helix 65	AH2	A	623	629	Right-handed alpha
Helix 66	AH3	A	636	658	Right-handed alpha
Helix 67	AH4	A	696	715	Right-handed alpha
Helix 68	AH5	A	741	767	Right-handed alpha
Helix 69	AH6	E	337	342	Right-handed alpha
Helix 70	AH7	E	403	410	Right-handed 310
Helix 71	AH8	E	416	422	Right-handed alpha
Helix 72	AH9	E	438	443	Right-handed alpha
Helix 73	AI1	D	12	23	Right-handed alpha
Helix 74	AI2	D	29	38	Right-handed alpha
Helix 75	AI3	D	40	55	Right-handed alpha
Helix 76	AI4	D	55	70	Right-handed alpha
Helix 77	AI5	D	72	81	Right-handed alpha
Helix 78	AI6	D	82	84	Right-handed 310
Helix 79	AI7	D	85	115	Right-handed alpha
Helix 80	AI8	D	121	125	Right-handed 310
Helix 81	AI9	D	137	142	Right-handed alpha
Helix 82	AJ1	D	145	151	Right-handed alpha
Helix 83	AJ2	D	168	187	Right-handed alpha
Helix 84	AJ3	D	195	216	Right-handed alpha
Helix 85	AJ4	D	220	229	Right-handed alpha
Helix 86	AJ5	D	237	252	Right-handed alpha
Helix 87	AJ6	D	257	263	Right-handed alpha
Helix 88	AJ7	D	271	321	Right-handed alpha
Helix 89	AJ8	D	332	340	Right-handed alpha
Helix 90	AJ9	D	344	349	Right-handed alpha
Helix 91	AK1	D	351	355	Right-handed 310
Helix 92	AK2	D	359	366	Right-handed alpha
Helix 93	AK3	D	372	383	Right-handed alpha
Helix 94	AK4	D	388	420	Right-handed alpha
Helix 95	AK5	D	423	427	Right-handed 310
Helix 96	AK6	D	429	446	Right-handed alpha
Helix 97	AK7	D	447	450	Right-handed 310
Helix 98	AK8	D	452	483	Right-handed alpha
Helix 99	AK9	D	485	498	Right-handed alpha
Helix 100	AL1	D	502	509	Right-handed alpha
Helix 101	AL2	D	512	528	Right-handed alpha
Helix 102	AL3	D	552	568	Right-handed alpha
Helix 103	AL4	D	569	580	Right-handed alpha
Helix 104	AL5	C	21	53	Right-handed alpha
Helix 105	AL6	C	56	81	Right-handed alpha
Helix 106	AL7	C	84	88	Right-handed 310
Helix 107	AL8	C	90	102	Right-handed alpha
Helix 108	AL9	C	109	130	Right-handed alpha
Helix 109	AM1	C	147	155	Right-handed alpha
Helix 110	AM2	C	157	172	Right-handed alpha
Helix 111	AM3	C	172	193	Right-handed alpha
Helix 112	AM4	C	198	205	Right-handed alpha
Helix 113	AM5	C	220	230	Right-handed alpha
Helix 114	AM6	C	233	249	Right-handed alpha
Helix 115	AM7	C	265	267	Right-handed 310
Helix 116	AM8	C	278	283	Right-handed alpha
Helix 117	AM9	C	293	300	Right-handed alpha
Helix 118	AN1	C	303	318	Right-handed alpha
Helix 119	AN2	C	326	331	Right-handed alpha
Helix 120	AN3	C	366	383	Right-handed alpha
Helix 121	AN4	C	384	388	Right-handed 310
Helix 122	AN5	C	389	393	Right-handed 310
Helix 123	AN6	C	399	412	Right-handed alpha
Helix 124	AN7	C	414	422	Right-handed alpha
Helix 125	AN8	C	431	444	Right-handed alpha
Helix 126	AN9	C	446	448	Right-handed 310
Helix 127	AO1	C	449	466	Right-handed alpha
Helix 128	AO2	C	472	484	Right-handed alpha
Helix 129	AO3	C	499	502	Right-handed 310
Helix 130	AO4	C	503	508	Right-handed alpha
Helix 131	AO5	C	513	533	Right-handed alpha
Helix 132	AO6	C	538	542	Right-handed 310
Helix 133	AO7	C	547	559	Right-handed alpha
Helix 134	AO8	C	565	574	Right-handed alpha
Helix 135	AO9	C	581	588	Right-handed alpha
Helix 136	AP1	C	588	599	Right-handed alpha
Helix 137	AP2	C	623	629	Right-handed alpha
Helix 138	AP3	C	636	658	Right-handed alpha
Helix 139	AP4	C	696	715	Right-handed alpha
Helix 140	AP5	C	741	767	Right-handed alpha
Helix 141	AP6	F	337	342	Right-handed alpha
Helix 142	AP7	F	403	410	Right-handed 310
Helix 143	AP8	F	416	422	Right-handed alpha
Helix 144	AP9	F	438	443	Right-handed alpha

There are 16 sheets in PDB entry 7Y76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	141	143	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	359	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	676	first strand
Strand 2	A	680	685	anti-parallel
Strand 3	A	618	622	anti-parallel
Strand 4	A	722	725	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	358	first strand
Strand 2	E	395	402	anti-parallel
Strand 3	E	508	514	anti-parallel
Strand 4	E	432	437	anti-parallel
Strand 5	E	378	379	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	391	392	first strand
Strand 2	E	524	525	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	453	first strand
Strand 2	E	493	494	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	473	474	first strand
Strand 2	E	488	489	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	141	143	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	676	first strand
Strand 2	C	680	685	anti-parallel
Strand 3	C	618	622	anti-parallel
Strand 4	C	722	725	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	354	358	first strand
Strand 2	F	395	402	anti-parallel
Strand 3	F	508	514	anti-parallel
Strand 4	F	432	437	anti-parallel
Strand 5	F	378	379	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	391	392	first strand
Strand 2	F	524	525	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	452	453	first strand
Strand 2	F	493	494	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	473	474	first strand
Strand 2	F	488	489	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Y76

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y76