Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y87


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y87 entry

There is 1 chain in PDB entry 7Y87 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 12ASP 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7Y87. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 41Right-handed alpha
Helix 2
AA2
A
47 58Right-handed alpha
Helix 3
AA3
A
58 67Right-handed alpha
Helix 4
AA4
A
71 93Right-handed alpha
Helix 5
AA5
A
100 118Right-handed alpha
Helix 6
AA6
A
131 142Right-handed alpha
Helix 7
AA7
A
146 174Right-handed alpha
Helix 8
AA8
A
178 190Right-handed alpha
Helix 9
AA9
A
191 197Right-handed alpha
Helix 10
AB1
A
197 204Right-handed alpha
Helix 11
AB2
A
208 213Right-handed alpha
Helix 12
AB3
A
214 236Right-handed alpha
Helix 13
AB4
A
236 248Right-handed alpha
Helix 14
AB5
A
255 265Right-handed alpha
Helix 15
AB6
A
267 294Right-handed alpha
Helix 16
AB7
A
295 297Right-handed 310
Helix 17
AB8
A
298 322Right-handed alpha
Helix 18
AB9
A
323 326Right-handed 310
Helix 19
AC1
A
358 363Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7Y87.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
340 342parallel
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