Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y97 entry

There are 2 chains in PDB entry 7Y97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 22ALA 401
B
 PRO 23ALA 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7Y97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 37Right-handed alpha
Helix 2
AA2
A
52 62Right-handed alpha
Helix 3
AA3
A
82 86Right-handed 310
Helix 4
AA4
A
89 99Right-handed alpha
Helix 5
AA5
A
100 102Right-handed 310
Helix 6
AA6
A
103 124Right-handed alpha
Helix 7
AA7
A
133 137Right-handed alpha
Helix 8
AA8
A
139 151Right-handed alpha
Helix 9
AA9
A
153 155Right-handed 310
Helix 10
AB1
A
156 168Right-handed alpha
Helix 11
AB2
A
175 207Right-handed alpha
Helix 12
AB3
A
211 219Right-handed alpha
Helix 13
AB4
A
227 260Right-handed alpha
Helix 14
AB5
A
262 270Right-handed alpha
Helix 15
AB6
A
273 285Right-handed alpha
Helix 16
AB7
A
316 320Right-handed alpha
Helix 17
AB8
A
353 371Right-handed alpha
Helix 18
AB9
B
26 36Right-handed alpha
Helix 19
AC1
B
52 62Right-handed alpha
Helix 20
AC2
B
82 86Right-handed 310
Helix 21
AC3
B
89 99Right-handed alpha
Helix 22
AC4
B
100 102Right-handed 310
Helix 23
AC5
B
103 124Right-handed alpha
Helix 24
AC6
B
133 137Right-handed alpha
Helix 25
AC7
B
139 150Right-handed alpha
Helix 26
AC8
B
153 155Right-handed 310
Helix 27
AC9
B
156 168Right-handed alpha
Helix 28
AD1
B
175 207Right-handed alpha
Helix 29
AD2
B
211 219Right-handed alpha
Helix 30
AD3
B
227 260Right-handed alpha
Helix 31
AD4
B
262 270Right-handed alpha
Helix 32
AD5
B
273 285Right-handed alpha
Helix 33
AD6
B
316 320Right-handed alpha
Helix 34
AD7
B
353 371Right-handed alpha
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There are 6 sheets in PDB entry 7Y97. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
311 315parallel
Strand 4
A
290 295anti-parallel
Strand 5
A
66 67anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
390 400anti-parallel
Strand 3
A
372 383anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 301first strand
Strand 2
A
304 306anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
B
47 50anti-parallel
Strand 3
B
311 315parallel
Strand 4
B
290 295anti-parallel
Strand 5
B
66 67anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
393 400anti-parallel
Strand 3
B
372 381anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 301first strand
Strand 2
B
304 306anti-parallel
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