Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y9P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y9P entry

There is 1 chain in PDB entry 7Y9P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PRO 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7Y9P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 51Right-handed alpha
Helix 2
AA2
A
99 104Right-handed alpha
Helix 3
AA3
A
106 110Right-handed 310
Helix 4
AA4
A
151 171Right-handed alpha
Helix 5
AA5
A
185 198Right-handed alpha
Helix 6
AA6
A
209 219Right-handed alpha
Helix 7
AA7
A
232 240Right-handed alpha
Helix 8
AA8
A
254 265Right-handed alpha
Helix 9
AA9
A
284 291Right-handed alpha
Helix 10
AB1
A
304 318Right-handed alpha
Helix 11
AB2
A
320 324Right-handed 310
Helix 12
AB3
A
327 332Right-handed 310
Helix 13
AB4
A
340 351Right-handed alpha
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There are 5 sheets in PDB entry 7Y9P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 21first strand
Strand 2
A
3 11anti-parallel
Strand 3
A
62 63anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 139first strand
Strand 2
A
30 38anti-parallel
Strand 3
A
68 75anti-parallel
Strand 4
A
87 90anti-parallel
Strand 5
A
143 145anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 139first strand
Strand 2
A
30 38anti-parallel
Strand 3
A
357 360anti-parallel
Strand 4
A
334 336parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
56 57anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
202 207parallel
Strand 3
A
178 182parallel
Strand 4
A
247 250parallel
Strand 5
A
270 273parallel
Strand 6
A
294 297parallel
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