Analysis of interatomic Contacts of Structural Units in PDB entry:
7YAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YAT entry

There are 24 chains in PDB entry 7YAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 119ASN 143
B
 GLY 119ASN 143
C
 GLY 119ASN 143
D
 GLY 119ASN 143
E
 GLY 119ASN 143
F
 GLY 119ASN 143
G
 GLY 119ASN 143
H
 GLY 119ASN 143
I
 GLY 119ASN 143
J
 GLY 119ASN 143
K
 GLY 119ASN 143
L
 GLY 119ASN 143
M
 GLY 119ASN 143
N
 GLY 119ASN 143
O
 GLY 119ASN 143
P
 GLY 119ASN 143
Q
 GLY 119ASN 143
R
 GLY 119ASN 143
S
 GLY 119ASN 143
T
 GLY 119ASN 143
U
 GLY 119ASN 143
V
 GLY 119ASN 143
X
 GLY 119ASN 143
Y
 GLY 119ASN 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7YAT

There are 16 sheets in PDB entry 7YAT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
121 122first strand
Strand 2
B
121 122parallel
Strand 3
C
121 122parallel
Strand 4
D
121 122parallel
Strand 5
A
121 122parallel
Strand 6
F
121 122parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
125 130first strand
Strand 2
B
125 130parallel
Strand 3
C
125 130parallel
Strand 4
D
125 130parallel
Strand 5
A
125 130parallel
Strand 6
F
125 130parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
133 135first strand
Strand 2
B
133 135parallel
Strand 3
C
133 135parallel
Strand 4
D
133 135parallel
Strand 5
A
133 135parallel
Strand 6
F
133 135parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
138 141first strand
Strand 2
B
138 141parallel
Strand 3
C
138 141parallel
Strand 4
D
138 141parallel
Strand 5
A
138 141parallel
Strand 6
F
138 141parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
121 122first strand
Strand 2
H
121 122parallel
Strand 3
I
121 122parallel
Strand 4
J
121 122parallel
Strand 5
K
121 122parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
125 130first strand
Strand 2
J
125 130parallel
Strand 3
I
125 130parallel
Strand 4
H
125 130parallel
Strand 5
G
125 130parallel
Strand 6
L
125 130parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
133 135first strand
Strand 2
J
133 135parallel
Strand 3
I
133 135parallel
Strand 4
H
133 135parallel
Strand 5
G
133 135parallel
Strand 6
L
133 135parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
138 141first strand
Strand 2
J
138 141parallel
Strand 3
I
138 141parallel
Strand 4
H
138 141parallel
Strand 5
G
138 141parallel
Strand 6
L
138 141parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
121 122first strand
Strand 2
P
121 122parallel
Strand 3
O
121 122parallel
Strand 4
N
121 122parallel
Strand 5
M
121 122parallel
Strand 6
R
121 122parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
125 130first strand
Strand 2
P
125 130parallel
Strand 3
O
125 130parallel
Strand 4
N
125 130parallel
Strand 5
M
125 130parallel
Strand 6
R
125 130parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
133 135first strand
Strand 2
P
133 135parallel
Strand 3
O
133 135parallel
Strand 4
N
133 135parallel
Strand 5
M
133 135parallel
Strand 6
R
133 135parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
138 141first strand
Strand 2
P
138 141parallel
Strand 3
O
138 141parallel
Strand 4
N
138 141parallel
Strand 5
M
138 141parallel
Strand 6
R
138 141parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
121 122first strand
Strand 2
V
121 122parallel
Strand 3
U
121 122parallel
Strand 4
T
121 122parallel
Strand 5
S
121 122parallel
Strand 6
Y
121 122parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
125 130first strand
Strand 2
V
125 130parallel
Strand 3
U
125 130parallel
Strand 4
T
125 130parallel
Strand 5
S
125 130parallel
Strand 6
Y
125 130parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
133 135first strand
Strand 2
V
133 135parallel
Strand 3
U
133 135parallel
Strand 4
T
133 135parallel
Strand 5
S
133 135parallel
Strand 6
Y
133 135parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
138 141first strand
Strand 2
V
138 141parallel
Strand 3
U
138 141parallel
Strand 4
T
138 141parallel
Strand 5
S
138 141parallel
Strand 6
Y
138 141parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il