Analysis of interatomic Contacts of Structural Units in PDB entry:
7YBH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YBH entry

There are 3 chains in PDB entry 7YBH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	PRO 1155
B	GLN 14	PRO 1155
C	GLN 14	PRO 1155

There are 73 helices in PDB entry 7YBH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	287	297	Right-handed alpha
Helix 2	AA2	A	331	336	Right-handed alpha
Helix 3	AA3	A	358	364	Right-handed alpha
Helix 4	AA4	A	376	383	Right-handed 310
Helix 5	AA5	A	398	404	Right-handed 310
Helix 6	AA6	A	609	613	Right-handed 310
Helix 7	AA7	A	730	736	Right-handed alpha
Helix 8	AA8	A	739	747	Right-handed alpha
Helix 9	AA9	A	752	776	Right-handed alpha
Helix 10	AB1	A	809	819	Right-handed alpha
Helix 11	AB2	A	823	828	Right-handed alpha
Helix 12	AB3	A	829	835	Right-handed alpha
Helix 13	AB4	A	843	849	Right-handed alpha
Helix 14	AB5	A	859	878	Right-handed alpha
Helix 15	AB6	A	879	883	Right-handed 310
Helix 16	AB7	A	890	903	Right-handed alpha
Helix 17	AB8	A	906	934	Right-handed alpha
Helix 18	AB9	A	935	937	Right-handed 310
Helix 19	AC1	A	938	959	Right-handed alpha
Helix 20	AC2	A	969	976	Right-handed alpha
Helix 21	AC3	A	981	1026	Right-handed alpha
Helix 22	AC4	A	1133	1154	Right-handed alpha
Helix 23	AC5	B	287	297	Right-handed alpha
Helix 24	AC6	B	330	336	Right-handed alpha
Helix 25	AC7	B	342	346	Right-handed 310
Helix 26	AC8	B	358	364	Right-handed alpha
Helix 27	AC9	B	376	382	Right-handed 310
Helix 28	AD1	B	398	404	Right-handed 310
Helix 29	AD2	B	409	415	Right-handed alpha
Helix 30	AD3	B	431	436	Right-handed alpha
Helix 31	AD4	B	612	618	Right-handed alpha
Helix 32	AD5	B	619	622	Right-handed 310
Helix 33	AD6	B	623	632	Right-handed alpha
Helix 34	AD7	B	731	737	Right-handed alpha
Helix 35	AD8	B	740	747	Right-handed alpha
Helix 36	AD9	B	748	750	Right-handed 310
Helix 37	AE1	B	751	776	Right-handed alpha
Helix 38	AE2	B	809	819	Right-handed alpha
Helix 39	AE3	B	845	849	Right-handed 310
Helix 40	AE4	B	859	878	Right-handed alpha
Helix 41	AE5	B	879	884	Right-handed alpha
Helix 42	AE6	B	890	903	Right-handed alpha
Helix 43	AE7	B	906	912	Right-handed alpha
Helix 44	AE8	B	912	934	Right-handed alpha
Helix 45	AE9	B	938	959	Right-handed alpha
Helix 46	AF1	B	969	977	Right-handed alpha
Helix 47	AF2	B	978	1026	Right-handed alpha
Helix 48	AF3	B	1109	1111	Right-handed 310
Helix 49	AF4	B	1133	1154	Right-handed alpha
Helix 50	AF5	C	287	296	Right-handed alpha
Helix 51	AF6	C	331	336	Right-handed alpha
Helix 52	AF7	C	342	346	Right-handed 310
Helix 53	AF8	C	357	364	Right-handed alpha
Helix 54	AF9	C	376	383	Right-handed 310
Helix 55	AG1	C	398	404	Right-handed 310
Helix 56	AG2	C	409	415	Right-handed alpha
Helix 57	AG3	C	611	616	Right-handed alpha
Helix 58	AG4	C	731	737	Right-handed alpha
Helix 59	AG5	C	740	746	Right-handed alpha
Helix 60	AG6	C	747	749	Right-handed 310
Helix 61	AG7	C	751	776	Right-handed alpha
Helix 62	AG8	C	809	819	Right-handed alpha
Helix 63	AG9	C	859	878	Right-handed alpha
Helix 64	AH1	C	879	883	Right-handed 310
Helix 65	AH2	C	890	902	Right-handed alpha
Helix 66	AH3	C	906	912	Right-handed alpha
Helix 67	AH4	C	912	934	Right-handed alpha
Helix 68	AH5	C	938	958	Right-handed alpha
Helix 69	AH6	C	959	961	Right-handed 310
Helix 70	AH7	C	969	975	Right-handed alpha
Helix 71	AH8	C	978	983	Right-handed alpha
Helix 72	AH9	C	984	1026	Right-handed alpha
Helix 73	AI1	C	1134	1154	Right-handed alpha

There are 43 sheets in PDB entry 7YBH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	256	261	anti-parallel
Strand 4	A	90	95	anti-parallel
Strand 5	A	189	197	anti-parallel
Strand 6	A	200	207	anti-parallel
Strand 7	A	225	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	264	272	anti-parallel
Strand 3	A	278	283	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	245	anti-parallel
Strand 3	A	141	143	parallel
Strand 4	A	154	157	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	245	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	168	172	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	312	first strand
Strand 2	A	585	591	anti-parallel
Strand 3	A	602	606	anti-parallel
Strand 4	A	641	644	anti-parallel
Strand 5	A	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	321	first strand
Strand 2	A	532	536	parallel
Strand 3	A	539	547	anti-parallel
Strand 4	A	577	581	anti-parallel
Strand 5	A	566	570	anti-parallel
Strand 6	A	558	560	anti-parallel
Strand 7	C	42	43	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	351	first strand
Strand 2	A	387	396	anti-parallel
Strand 3	A	500	509	anti-parallel
Strand 4	A	425	430	anti-parallel
Strand 5	A	369	372	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	447	first strand
Strand 2	A	485	487	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	467	first strand
Strand 2	A	481	482	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	648	first strand
Strand 2	A	684	689	parallel
Strand 3	A	663	668	anti-parallel
Strand 4	A	657	660	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	694	695	first strand
Strand 2	C	780	781	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	708	first strand
Strand 2	A	1065	1069	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	721	first strand
Strand 2	A	1052	1062	anti-parallel
Strand 3	A	1040	1049	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1113	1118	first strand
Strand 2	A	1079	1083	anti-parallel
Strand 3	A	1074	1075	anti-parallel
Strand 4	A	1126	1127	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1087	1089	first strand
Strand 2	A	1096	1098	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	67	anti-parallel
Strand 3	B	256	262	anti-parallel
Strand 4	B	90	95	anti-parallel
Strand 5	B	190	197	anti-parallel
Strand 6	B	200	207	anti-parallel
Strand 7	B	224	229	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	264	272	anti-parallel
Strand 3	B	278	283	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	242	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	115	120	anti-parallel
Strand 5	B	127	132	anti-parallel
Strand 6	B	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	144	first strand
Strand 2	B	153	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	307	first strand
Strand 2	B	589	592	anti-parallel
Strand 3	B	602	606	anti-parallel
Strand 4	B	641	644	anti-parallel
Strand 5	B	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	321	first strand
Strand 2	B	532	536	parallel
Strand 3	B	539	547	anti-parallel
Strand 4	B	577	581	anti-parallel
Strand 5	B	568	570	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	351	first strand
Strand 2	B	388	396	anti-parallel
Strand 3	B	500	507	anti-parallel
Strand 4	B	424	430	anti-parallel
Strand 5	B	370	372	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	385	first strand
Strand 2	B	517	518	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	486	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	647	648	first strand
Strand 2	B	684	689	parallel
Strand 3	B	663	668	anti-parallel
Strand 4	B	657	660	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	721	first strand
Strand 2	B	1052	1069	anti-parallel
Strand 3	B	1040	1049	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1074	1075	first strand
Strand 2	B	1126	1127	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1080	1083	first strand
Strand 2	B	1113	1116	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1087	1090	first strand
Strand 2	B	1095	1098	anti-parallel
Strand 3	B	1106	1107	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	29	first strand
Strand 2	C	62	66	anti-parallel
Strand 3	C	257	261	anti-parallel
Strand 4	C	90	95	anti-parallel
Strand 5	C	190	197	anti-parallel
Strand 6	C	200	207	anti-parallel
Strand 7	C	225	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	264	272	anti-parallel
Strand 3	C	278	283	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	168	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	143	first strand
Strand 2	C	154	158	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	312	first strand
Strand 2	C	585	591	anti-parallel
Strand 3	C	602	606	anti-parallel
Strand 4	C	641	644	anti-parallel
Strand 5	C	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	321	first strand
Strand 2	C	532	536	parallel
Strand 3	C	539	547	anti-parallel
Strand 4	C	577	581	anti-parallel
Strand 5	C	568	570	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	351	first strand
Strand 2	C	388	396	anti-parallel
Strand 3	C	500	508	anti-parallel
Strand 4	C	425	430	anti-parallel
Strand 5	C	369	372	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	517	518	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	447	first strand
Strand 2	C	485	487	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	657	660	first strand
Strand 2	C	663	668	anti-parallel
Strand 3	C	684	689	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	706	708	first strand
Strand 2	C	1065	1067	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	721	first strand
Strand 2	C	1052	1062	anti-parallel
Strand 3	C	1040	1049	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1069	1070	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1095	1098	anti-parallel
Strand 4	C	1106	1107	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1113	1118	first strand
Strand 2	C	1079	1083	anti-parallel
Strand 3	C	1074	1075	anti-parallel
Strand 4	C	1126	1127	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YBH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YBH