Analysis of interatomic Contacts of Structural Units in PDB entry:
7YC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YC0 entry

There are 3 chains in PDB entry 7YC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ARG 316
B
 VAL 2ARG 316
C
 VAL 2ARG 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7YC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 18Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
28 40Right-handed alpha
Helix 4
AA4
A
59 61Right-handed 310
Helix 5
AA5
A
97 108Right-handed alpha
Helix 6
AA6
A
126 138Right-handed alpha
Helix 7
AA7
A
138 143Right-handed alpha
Helix 8
AA8
A
159 176Right-handed alpha
Helix 9
AA9
A
196 202Right-handed alpha
Helix 10
AB1
A
209 221Right-handed alpha
Helix 11
AB2
A
223 229Right-handed alpha
Helix 12
AB3
A
233 237Right-handed 310
Helix 13
AB4
A
238 243Right-handed alpha
Helix 14
AB5
A
258 272Right-handed alpha
Helix 15
AB6
A
291 295Right-handed 310
Helix 16
AB7
A
297 315Right-handed alpha
Helix 17
AB8
B
8 18Right-handed alpha
Helix 18
AB9
B
23 27Right-handed 310
Helix 19
AC1
B
28 40Right-handed alpha
Helix 20
AC2
B
97 109Right-handed alpha
Helix 21
AC3
B
126 138Right-handed alpha
Helix 22
AC4
B
138 143Right-handed alpha
Helix 23
AC5
B
159 176Right-handed alpha
Helix 24
AC6
B
196 202Right-handed alpha
Helix 25
AC7
B
209 221Right-handed alpha
Helix 26
AC8
B
223 229Right-handed alpha
Helix 27
AC9
B
233 237Right-handed 310
Helix 28
AD1
B
238 243Right-handed alpha
Helix 29
AD2
B
258 272Right-handed alpha
Helix 30
AD3
B
291 295Right-handed 310
Helix 31
AD4
B
297 315Right-handed alpha
Helix 32
AD5
C
8 18Right-handed alpha
Helix 33
AD6
C
23 27Right-handed 310
Helix 34
AD7
C
28 40Right-handed alpha
Helix 35
AD8
C
59 61Right-handed 310
Helix 36
AD9
C
97 109Right-handed alpha
Helix 37
AE1
C
126 139Right-handed alpha
Helix 38
AE2
C
142 147Right-handed alpha
Helix 39
AE3
C
159 176Right-handed alpha
Helix 40
AE4
C
196 202Right-handed alpha
Helix 41
AE5
C
209 221Right-handed alpha
Helix 42
AE6
C
223 228Right-handed alpha
Helix 43
AE7
C
233 237Right-handed 310
Helix 44
AE8
C
238 243Right-handed alpha
Helix 45
AE9
C
258 272Right-handed alpha
Helix 46
AF1
C
291 295Right-handed 310
Helix 47
AF2
C
297 315Right-handed alpha
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There are 2 sheets in PDB entry 7YC0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 57first strand
Strand 2
A
63 71anti-parallel
Strand 3
A
111 115anti-parallel
Strand 4
A
78 84parallel
Strand 5
A
148 158parallel
Strand 6
A
182 186parallel
Strand 7
A
247 255parallel
Strand 8
A
276 285parallel
Strand 9
B
276 285anti-parallel
Strand 10
B
247 255parallel
Strand 11
B
182 186parallel
Strand 12
B
148 158parallel
Strand 13
B
78 84parallel
Strand 14
B
111 115parallel
Strand 15
B
63 70anti-parallel
Strand 16
B
50 57anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 57first strand
Strand 2
C
63 71anti-parallel
Strand 3
C
111 115anti-parallel
Strand 4
C
78 84parallel
Strand 5
C
148 158parallel
Strand 6
C
182 186parallel
Strand 7
C
247 253parallel
Strand 8
C
276 281parallel
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