Analysis of interatomic Contacts of Structural Units in PDB entry:
7YC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YC2 entry

There are 8 chains in PDB entry 7YC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 489VAL 727
B
 SER 489LEU 722
C
 SER 489VAL 727
D
 SER 489VAL 727
E
 GLY 2ALA 8
F
 GLY 2ALA 8
G
 GLY 2ALA 8
H
 GLY 2ALA 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7YC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
489 507Right-handed alpha
Helix 2
AA2
A
511 525Right-handed alpha
Helix 3
AA3
A
528 538Right-handed alpha
Helix 4
AA4
A
539 551Right-handed alpha
Helix 5
AA5
A
554 570Right-handed alpha
Helix 6
AA6
A
571 573Right-handed 310
Helix 7
AA7
A
574 579Right-handed alpha
Helix 8
AA8
A
580 591Right-handed alpha
Helix 9
AA9
A
595 611Right-handed alpha
Helix 10
AB1
A
620 637Right-handed alpha
Helix 11
AB2
A
651 653Right-handed 310
Helix 12
AB3
A
654 659Right-handed alpha
Helix 13
AB4
A
663 681Right-handed alpha
Helix 14
AB5
A
681 692Right-handed alpha
Helix 15
AB6
A
693 703Right-handed alpha
Helix 16
AB7
A
708 727Right-handed alpha
Helix 17
AB8
B
490 507Right-handed alpha
Helix 18
AB9
B
511 524Right-handed alpha
Helix 19
AC1
B
528 538Right-handed alpha
Helix 20
AC2
B
539 551Right-handed alpha
Helix 21
AC3
B
554 571Right-handed alpha
Helix 22
AC4
B
574 579Right-handed alpha
Helix 23
AC5
B
580 592Right-handed alpha
Helix 24
AC6
B
595 612Right-handed alpha
Helix 25
AC7
B
612 617Right-handed alpha
Helix 26
AC8
B
620 637Right-handed alpha
Helix 27
AC9
B
653 659Right-handed alpha
Helix 28
AD1
B
663 681Right-handed alpha
Helix 29
AD2
B
681 692Right-handed alpha
Helix 30
AD3
B
693 704Right-handed alpha
Helix 31
AD4
B
708 722Right-handed alpha
Helix 32
AD5
C
490 507Right-handed alpha
Helix 33
AD6
C
511 525Right-handed alpha
Helix 34
AD7
C
528 538Right-handed alpha
Helix 35
AD8
C
539 551Right-handed alpha
Helix 36
AD9
C
554 571Right-handed alpha
Helix 37
AE1
C
572 579Right-handed 310
Helix 38
AE2
C
580 591Right-handed alpha
Helix 39
AE3
C
595 611Right-handed alpha
Helix 40
AE4
C
612 617Right-handed alpha
Helix 41
AE5
C
620 638Right-handed alpha
Helix 42
AE6
C
651 653Right-handed 310
Helix 43
AE7
C
654 660Right-handed alpha
Helix 44
AE8
C
663 681Right-handed alpha
Helix 45
AE9
C
681 692Right-handed alpha
Helix 46
AF1
C
693 703Right-handed alpha
Helix 47
AF2
C
708 727Right-handed alpha
Helix 48
AF3
D
490 507Right-handed alpha
Helix 49
AF4
D
511 525Right-handed alpha
Helix 50
AF5
D
528 538Right-handed alpha
Helix 51
AF6
D
539 551Right-handed alpha
Helix 52
AF7
D
554 570Right-handed alpha
Helix 53
AF8
D
571 579Right-handed 310
Helix 54
AF9
D
580 592Right-handed alpha
Helix 55
AG1
D
595 611Right-handed alpha
Helix 56
AG2
D
620 637Right-handed alpha
Helix 57
AG3
D
653 659Right-handed alpha
Helix 58
AG4
D
663 681Right-handed alpha
Helix 59
AG5
D
681 690Right-handed alpha
Helix 60
AG6
D
693 703Right-handed alpha
Helix 61
AG7
D
708 727Right-handed alpha
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There are 2 sheets in PDB entry 7YC2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 647first strand
Strand 2
F
3 4anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
646 647first strand
Strand 2
G
3 4anti-parallel
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