Analysis of interatomic Contacts of Structural Units in PDB entry:
7YCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YCJ entry

There are 2 chains in PDB entry 7YCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 14LYS 515
B
 SER 289ASP 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7YCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 37Right-handed alpha
Helix 2
AA2
A
46 56Right-handed alpha
Helix 3
AA3
A
60 78Right-handed alpha
Helix 4
AA4
A
83 95Right-handed alpha
Helix 5
AA5
A
98 113Right-handed alpha
Helix 6
AA6
A
115 125Right-handed alpha
Helix 7
AA7
A
127 137Right-handed alpha
Helix 8
AA8
A
139 154Right-handed alpha
Helix 9
AA9
A
156 166Right-handed alpha
Helix 10
AB1
A
168 176Right-handed alpha
Helix 11
AB2
A
180 194Right-handed alpha
Helix 12
AB3
A
197 207Right-handed alpha
Helix 13
AB4
A
208 216Right-handed alpha
Helix 14
AB5
A
217 219Right-handed 310
Helix 15
AB6
A
221 236Right-handed alpha
Helix 16
AB7
A
238 249Right-handed alpha
Helix 17
AB8
A
251 260Right-handed alpha
Helix 18
AB9
A
264 278Right-handed alpha
Helix 19
AC1
A
281 291Right-handed alpha
Helix 20
AC2
A
292 301Right-handed alpha
Helix 21
AC3
A
305 320Right-handed alpha
Helix 22
AC4
A
321 324Right-handed 310
Helix 23
AC5
A
325 332Right-handed alpha
Helix 24
AC6
A
334 341Right-handed alpha
Helix 25
AC7
A
342 344Right-handed 310
Helix 26
AC8
A
347 365Right-handed alpha
Helix 27
AC9
A
368 375Right-handed alpha
Helix 28
AD1
A
376 387Right-handed alpha
Helix 29
AD2
A
389 404Right-handed alpha
Helix 30
AD3
A
405 408Right-handed 310
Helix 31
AD4
A
409 416Right-handed alpha
Helix 32
AD5
A
418 426Right-handed alpha
Helix 33
AD6
A
430 445Right-handed alpha
Helix 34
AD7
A
451 457Right-handed alpha
Helix 35
AD8
A
465 474Right-handed alpha
Helix 36
AD9
A
477 493Right-handed alpha
Helix 37
AE1
A
496 505Right-handed alpha
Helix 38
AE2
A
506 515Right-handed alpha
Helix 39
AE3
B
289 295Right-handed 310
Helix 40
AE4
B
331 338Right-handed alpha
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There are no sheets in PDB entry 7YCJ
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