Analysis of interatomic Contacts of Structural Units in PDB entry:
7YE2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YE2 entry

There are 13 chains in PDB entry 7YE2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 4	LEU 330
B	GLU 3	GLU 234
C	GLN 3	ASN 1355
D	THR 17	GLU 1380
E	ARG 3	LEU 71
F	ASP 110	ASP 652
H	G -47	G 2
H	G 4	G 10
H	G 12	G 20
I	C -20	G -14
I	C -12	G -6
I	C -4	C 47
G	PRO 105	LYS 157

There are123 helices in PDB entry 7YE2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	53	Right-handed alpha
Helix 2	AA2	A	80	89	Right-handed alpha
Helix 3	AA3	A	212	230	Right-handed alpha
Helix 4	AA4	A	264	274	Right-handed alpha
Helix 5	AA5	A	279	285	Right-handed alpha
Helix 6	AA6	A	287	291	Right-handed 310
Helix 7	AA7	A	302	312	Right-handed alpha
Helix 8	AA8	B	37	51	Right-handed alpha
Helix 9	AA9	B	80	90	Right-handed alpha
Helix 10	AB1	B	114	116	Right-handed 310
Helix 11	AB2	B	211	227	Right-handed alpha
Helix 12	AB3	C	28	39	Right-handed alpha
Helix 13	AB4	C	44	48	Right-handed 310
Helix 14	AB5	C	52	61	Right-handed alpha
Helix 15	AB6	C	85	93	Right-handed alpha
Helix 16	AB7	C	203	207	Right-handed 310
Helix 17	AB8	C	211	220	Right-handed alpha
Helix 18	AB9	C	276	286	Right-handed alpha
Helix 19	AC1	C	330	335	Right-handed alpha
Helix 20	AC2	C	354	362	Right-handed alpha
Helix 21	AC3	C	366	379	Right-handed alpha
Helix 22	AC4	C	385	397	Right-handed alpha
Helix 23	AC5	C	406	417	Right-handed alpha
Helix 24	AC6	C	429	444	Right-handed alpha
Helix 25	AC7	C	463	488	Right-handed alpha
Helix 26	AC8	C	503	516	Right-handed alpha
Helix 27	AC9	C	527	536	Right-handed alpha
Helix 28	AD1	C	551	556	Right-handed alpha
Helix 29	AD2	C	559	563	Right-handed 310
Helix 30	AD3	C	663	667	Right-handed 310
Helix 31	AD4	C	669	674	Right-handed alpha
Helix 32	AD5	C	684	694	Right-handed alpha
Helix 33	AD6	C	710	718	Right-handed alpha
Helix 34	AD7	C	826	831	Right-handed alpha
Helix 35	AD8	C	902	913	Right-handed alpha
Helix 36	AD9	C	951	988	Right-handed alpha
Helix 37	AE1	C	1007	1011	Right-handed 310
Helix 38	AE2	C	1023	1057	Right-handed alpha
Helix 39	AE3	C	1119	1124	Right-handed alpha
Helix 40	AE4	C	1127	1151	Right-handed alpha
Helix 41	AE5	C	1156	1167	Right-handed alpha
Helix 42	AE6	C	1182	1191	Right-handed alpha
Helix 43	AE7	C	1205	1216	Right-handed alpha
Helix 44	AE8	C	1285	1295	Right-handed alpha
Helix 45	AE9	C	1297	1305	Right-handed alpha
Helix 46	AF1	C	1311	1325	Right-handed alpha
Helix 47	AF2	C	1334	1347	Right-handed alpha
Helix 48	AF3	D	27	34	Right-handed alpha
Helix 49	AF4	D	59	64	Right-handed alpha
Helix 50	AF5	D	71	75	Right-handed 310
Helix 51	AF6	D	97	102	Right-handed alpha
Helix 52	AF7	D	114	119	Right-handed alpha
Helix 53	AF8	D	132	141	Right-handed alpha
Helix 54	AF9	D	164	169	Right-handed alpha
Helix 55	AG1	D	183	194	Right-handed alpha
Helix 56	AG2	D	195	208	Right-handed alpha
Helix 57	AG3	D	214	233	Right-handed alpha
Helix 58	AG4	D	235	238	Right-handed 310
Helix 59	AG5	D	265	288	Right-handed alpha
Helix 60	AG6	D	290	310	Right-handed alpha
Helix 61	AG7	D	328	335	Right-handed alpha
Helix 62	AG8	D	372	379	Right-handed alpha
Helix 63	AG9	D	379	390	Right-handed alpha
Helix 64	AH1	D	395	405	Right-handed alpha
Helix 65	AH2	D	407	418	Right-handed alpha
Helix 66	AH3	D	432	434	Right-handed 310
Helix 67	AH4	D	452	460	Right-handed alpha
Helix 68	AH5	D	475	485	Right-handed alpha
Helix 69	AH6	D	487	491	Right-handed 310
Helix 70	AH7	D	506	517	Right-handed alpha
Helix 71	AH8	D	531	540	Right-handed alpha
Helix 72	AH9	D	572	581	Right-handed alpha
Helix 73	AI1	D	588	593	Right-handed alpha
Helix 74	AI2	D	597	612	Right-handed alpha
Helix 75	AI3	D	613	634	Right-handed alpha
Helix 76	AI4	D	647	649	Right-handed 310
Helix 77	AI5	D	650	664	Right-handed alpha
Helix 78	AI6	D	674	683	Right-handed alpha
Helix 79	AI7	D	689	703	Right-handed alpha
Helix 80	AI8	D	716	724	Right-handed alpha
Helix 81	AI9	D	729	737	Right-handed alpha
Helix 82	AJ1	D	764	800	Right-handed alpha
Helix 83	AJ2	D	830	835	Right-handed alpha
Helix 84	AJ3	D	861	871	Right-handed alpha
Helix 85	AJ4	D	892	896	Right-handed alpha
Helix 86	AJ5	D	910	921	Right-handed alpha
Helix 87	AJ6	D	1128	1138	Right-handed alpha
Helix 88	AJ7	D	1212	1220	Right-handed alpha
Helix 89	AJ8	D	1221	1241	Right-handed alpha
Helix 90	AJ9	D	1245	1257	Right-handed alpha
Helix 91	AK1	D	1276	1288	Right-handed alpha
Helix 92	AK2	D	1317	1322	Right-handed alpha
Helix 93	AK3	D	1326	1333	Right-handed alpha
Helix 94	AK4	D	1342	1350	Right-handed alpha
Helix 95	AK5	D	1356	1379	Right-handed alpha
Helix 96	AK6	E	6	11	Right-handed alpha
Helix 97	AK7	E	17	32	Right-handed alpha
Helix 98	AK8	E	44	52	Right-handed alpha
Helix 99	AK9	E	53	55	Right-handed 310
Helix 100	AL1	E	56	69	Right-handed alpha
Helix 101	AL2	F	114	126	Right-handed alpha
Helix 102	AL3	F	133	153	Right-handed alpha
Helix 103	AL4	F	156	169	Right-handed alpha
Helix 104	AL5	F	181	189	Right-handed alpha
Helix 105	AL6	F	237	275	Right-handed alpha
Helix 106	AL7	F	281	301	Right-handed alpha
Helix 107	AL8	F	304	333	Right-handed alpha
Helix 108	AL9	F	339	349	Right-handed alpha
Helix 109	AM1	F	363	371	Right-handed alpha
Helix 110	AM2	F	374	391	Right-handed alpha
Helix 111	AM3	F	397	422	Right-handed alpha
Helix 112	AM4	F	423	431	Right-handed alpha
Helix 113	AM5	F	440	457	Right-handed alpha
Helix 114	AM6	F	466	484	Right-handed alpha
Helix 115	AM7	F	493	514	Right-handed alpha
Helix 116	AM8	F	519	527	Right-handed alpha
Helix 117	AM9	F	530	538	Right-handed alpha
Helix 118	AN1	F	558	562	Right-handed 310
Helix 119	AN2	F	570	589	Right-handed alpha
Helix 120	AN3	F	592	604	Right-handed alpha
Helix 121	AN4	F	612	619	Right-handed alpha
Helix 122	AN5	F	624	638	Right-handed alpha
Helix 123	AN6	G	143	151	Right-handed alpha

There are 41 sheets in PDB entry 7YE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	18	first strand
Strand 2	A	28	31	anti-parallel
Strand 3	A	198	203	anti-parallel
Strand 4	A	186	189	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	63	first strand
Strand 2	A	169	170	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	125	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	107	first strand
Strand 2	A	142	145	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	114	first strand
Strand 2	A	132	134	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	181	first strand
Strand 2	A	206	207	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	28	first strand
Strand 2	B	203	206	anti-parallel
Strand 3	B	179	183	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	95	first strand
Strand 2	B	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	103	105	anti-parallel
Strand 3	B	144	146	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	79	first strand
Strand 2	C	98	107	anti-parallel
Strand 3	C	126	133	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	461	462	first strand
Strand 2	C	153	155	anti-parallel
Strand 3	C	538	539	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	164	first strand
Strand 2	C	179	183	anti-parallel
Strand 3	C	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	291	292	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	588	589	first strand
Strand 2	C	595	601	anti-parallel
Strand 3	C	611	615	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	588	589	first strand
Strand 2	C	595	601	anti-parallel
Strand 3	C	659	661	anti-parallel
Strand 4	C	624	625	parallel
Strand 5	C	642	644	anti-parallel
Strand 6	C	649	651	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	723	724	first strand
Strand 2	C	788	790	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	734	first strand
Strand 2	C	739	741	anti-parallel
Strand 3	C	755	757	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	763	764	first strand
Strand 2	C	770	771	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	795	796	first strand
Strand 2	C	799	800	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	805	809	first strand
Strand 2	C	1241	1245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1098	first strand
Strand 2	C	822	825	parallel
Strand 3	C	1114	1115	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	842	844	first strand
Strand 2	C	1066	1072	anti-parallel
Strand 3	C	934	941	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	888	890	first strand
Strand 2	C	924	925	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	893	895	first strand
Strand 2	C	919	921	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1105	1106	first strand
Strand 2	C	1226	1227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1259	1260	first strand
Strand 2	D	352	359	anti-parallel
Strand 3	D	467	471	anti-parallel
Strand 4	D	423	427	anti-parallel
Strand 5	D	436	439	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1259	1260	first strand
Strand 2	D	352	359	anti-parallel
Strand 3	D	449	451	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1283	1284	first strand
Strand 2	D	347	348	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1352	1354	first strand
Strand 2	D	19	22	anti-parallel
Strand 3	D	1337	1338	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	38	first strand
Strand 2	D	103	113	parallel
Strand 3	D	240	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	147	first strand
Strand 2	D	180	181	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	256	first strand
Strand 2	D	262	264	anti-parallel
Strand 3	F	545	546	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	371	first strand
Strand 2	D	442	444	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	553	first strand
Strand 2	D	567	568	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	805	807	first strand
Strand 2	D	890	891	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	816	818	first strand
Strand 2	D	876	878	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	822	823	first strand
Strand 2	D	826	827	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1152	1153	first strand
Strand 2	D	1199	1200	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1259	1262	first strand
Strand 2	D	1298	1301	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	122	first strand
Strand 2	G	131	132	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YE2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YE2