Analysis of interatomic Contacts of Structural Units in PDB entry:
7YEA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YEA entry

There are 2 chains in PDB entry 7YEA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 23PRO 1039
B
 GLY 23PRO 1039
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 7YEA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 35Right-handed alpha
Helix 2
AA2
A
37 51Right-handed alpha
Helix 3
AA3
A
55 68Right-handed alpha
Helix 4
AA4
A
70 85Right-handed alpha
Helix 5
AA5
A
88 103Right-handed alpha
Helix 6
AA6
A
104 115Right-handed alpha
Helix 7
AA7
A
123 135Right-handed alpha
Helix 8
AA8
A
138 153Right-handed alpha
Helix 9
AA9
A
159 171Right-handed alpha
Helix 10
AB1
A
172 187Right-handed alpha
Helix 11
AB2
A
194 205Right-handed alpha
Helix 12
AB3
A
206 220Right-handed alpha
Helix 13
AB4
A
225 238Right-handed alpha
Helix 14
AB5
A
241 253Right-handed alpha
Helix 15
AB6
A
260 273Right-handed alpha
Helix 16
AB7
A
274 289Right-handed alpha
Helix 17
AB8
A
292 305Right-handed alpha
Helix 18
AB9
A
308 323Right-handed alpha
Helix 19
AC1
A
326 339Right-handed alpha
Helix 20
AC2
A
342 357Right-handed alpha
Helix 21
AC3
A
360 375Right-handed alpha
Helix 22
AC4
A
377 391Right-handed alpha
Helix 23
AC5
A
394 409Right-handed alpha
Helix 24
AC6
A
411 425Right-handed alpha
Helix 25
AC7
A
428 443Right-handed alpha
Helix 26
AC8
A
444 459Right-handed alpha
Helix 27
AC9
A
462 476Right-handed alpha
Helix 28
AD1
A
481 499Right-handed alpha
Helix 29
AD2
A
507 513Right-handed 310
Helix 30
AD3
A
516 538Right-handed alpha
Helix 31
AD4
A
570 575Right-handed alpha
Helix 32
AD5
A
576 581Right-handed 310
Helix 33
AD6
A
599 608Right-handed alpha
Helix 34
AD7
A
620 632Right-handed alpha
Helix 35
AD8
A
648 653Right-handed alpha
Helix 36
AD9
A
685 692Right-handed 310
Helix 37
AE1
A
707 712Right-handed alpha
Helix 38
AE2
A
713 717Right-handed 310
Helix 39
AE3
A
740 746Right-handed alpha
Helix 40
AE4
A
780 792Right-handed alpha
Helix 41
AE5
A
809 814Right-handed alpha
Helix 42
AE6
A
814 819Right-handed alpha
Helix 43
AE7
A
833 836Right-handed 310
Helix 44
AE8
A
854 867Right-handed alpha
Helix 45
AE9
A
879 881Right-handed 310
Helix 46
AF1
A
882 893Right-handed alpha
Helix 47
AF2
A
907 914Right-handed alpha
Helix 48
AF3
A
915 918Right-handed 310
Helix 49
AF4
A
931 940Right-handed alpha
Helix 50
AF5
A
950 964Right-handed alpha
Helix 51
AF6
A
965 969Right-handed 310
Helix 52
AF7
A
972 986Right-handed alpha
Helix 53
AF8
A
986 1004Right-handed alpha
Helix 54
AF9
A
1008 1029Right-handed alpha
Helix 55
AG1
B
26 35Right-handed alpha
Helix 56
AG2
B
37 51Right-handed alpha
Helix 57
AG3
B
55 68Right-handed alpha
Helix 58
AG4
B
70 85Right-handed alpha
Helix 59
AG5
B
88 103Right-handed alpha
Helix 60
AG6
B
104 115Right-handed alpha
Helix 61
AG7
B
123 135Right-handed alpha
Helix 62
AG8
B
138 153Right-handed alpha
Helix 63
AG9
B
159 171Right-handed alpha
Helix 64
AH1
B
172 187Right-handed alpha
Helix 65
AH2
B
194 205Right-handed alpha
Helix 66
AH3
B
206 220Right-handed alpha
Helix 67
AH4
B
225 238Right-handed alpha
Helix 68
AH5
B
241 253Right-handed alpha
Helix 69
AH6
B
260 273Right-handed alpha
Helix 70
AH7
B
274 289Right-handed alpha
Helix 71
AH8
B
292 305Right-handed alpha
Helix 72
AH9
B
308 323Right-handed alpha
Helix 73
AI1
B
326 339Right-handed alpha
Helix 74
AI2
B
342 357Right-handed alpha
Helix 75
AI3
B
360 375Right-handed alpha
Helix 76
AI4
B
377 391Right-handed alpha
Helix 77
AI5
B
394 409Right-handed alpha
Helix 78
AI6
B
411 425Right-handed alpha
Helix 79
AI7
B
428 443Right-handed alpha
Helix 80
AI8
B
444 459Right-handed alpha
Helix 81
AI9
B
462 476Right-handed alpha
Helix 82
AJ1
B
481 499Right-handed alpha
Helix 83
AJ2
B
507 513Right-handed 310
Helix 84
AJ3
B
516 538Right-handed alpha
Helix 85
AJ4
B
570 575Right-handed alpha
Helix 86
AJ5
B
576 581Right-handed 310
Helix 87
AJ6
B
599 608Right-handed alpha
Helix 88
AJ7
B
620 632Right-handed alpha
Helix 89
AJ8
B
648 653Right-handed alpha
Helix 90
AJ9
B
685 692Right-handed 310
Helix 91
AK1
B
707 712Right-handed alpha
Helix 92
AK2
B
713 717Right-handed 310
Helix 93
AK3
B
740 746Right-handed alpha
Helix 94
AK4
B
780 792Right-handed alpha
Helix 95
AK5
B
809 814Right-handed alpha
Helix 96
AK6
B
814 819Right-handed alpha
Helix 97
AK7
B
833 836Right-handed 310
Helix 98
AK8
B
854 867Right-handed alpha
Helix 99
AK9
B
879 881Right-handed 310
Helix 100
AL1
B
882 893Right-handed alpha
Helix 101
AL2
B
907 914Right-handed alpha
Helix 102
AL3
B
915 918Right-handed 310
Helix 103
AL4
B
931 940Right-handed alpha
Helix 104
AL5
B
950 964Right-handed alpha
Helix 105
AL6
B
965 969Right-handed 310
Helix 106
AL7
B
972 986Right-handed alpha
Helix 107
AL8
B
986 1004Right-handed alpha
Helix 108
AL9
B
1008 1029Right-handed alpha
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There are 8 sheets in PDB entry 7YEA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 614first strand
Strand 2
A
586 592parallel
Strand 3
A
556 562parallel
Strand 4
A
635 638parallel
Strand 5
A
658 661parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
679 680first strand
Strand 2
A
698 699parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 754first strand
Strand 2
A
774 777anti-parallel
Strand 3
A
719 721parallel
Strand 4
A
734 738anti-parallel
Strand 5
A
827 831anti-parallel
Strand 6
A
802 806parallel
Strand 7
A
796 799anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
900 903first strand
Strand 2
A
871 876parallel
Strand 3
A
842 845parallel
Strand 4
A
920 921parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
612 614first strand
Strand 2
B
586 592parallel
Strand 3
B
556 562parallel
Strand 4
B
635 638parallel
Strand 5
B
658 661parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
679 680first strand
Strand 2
B
698 699parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
752 754first strand
Strand 2
B
774 777anti-parallel
Strand 3
B
719 721parallel
Strand 4
B
734 738anti-parallel
Strand 5
B
827 831anti-parallel
Strand 6
B
802 806parallel
Strand 7
B
796 799anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
900 903first strand
Strand 2
B
871 876parallel
Strand 3
B
842 845parallel
Strand 4
B
920 921parallel
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