Analysis of interatomic Contacts of Structural Units in PDB entry:
7YEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YEH entry

There are 4 chains in PDB entry 7YEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 20PRO 1039
A
 SER 20PRO 1039
C
 ARG 59ALA 443
D
 GLY 406GLN 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 7YEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
26 35Right-handed alpha
Helix 2
AA2
B
37 49Right-handed alpha
Helix 3
AA3
B
55 68Right-handed alpha
Helix 4
AA4
B
70 85Right-handed alpha
Helix 5
AA5
B
88 102Right-handed alpha
Helix 6
AA6
B
104 119Right-handed alpha
Helix 7
AA7
B
123 137Right-handed alpha
Helix 8
AA8
B
138 153Right-handed alpha
Helix 9
AA9
B
156 170Right-handed alpha
Helix 10
AB1
B
172 187Right-handed alpha
Helix 11
AB2
B
191 205Right-handed alpha
Helix 12
AB3
B
206 221Right-handed alpha
Helix 13
AB4
B
224 238Right-handed alpha
Helix 14
AB5
B
240 255Right-handed alpha
Helix 15
AB6
B
258 273Right-handed alpha
Helix 16
AB7
B
274 289Right-handed alpha
Helix 17
AB8
B
292 307Right-handed alpha
Helix 18
AB9
B
308 310Right-handed 310
Helix 19
AC1
B
311 323Right-handed alpha
Helix 20
AC2
B
326 340Right-handed alpha
Helix 21
AC3
B
342 357Right-handed alpha
Helix 22
AC4
B
360 374Right-handed alpha
Helix 23
AC5
B
377 391Right-handed alpha
Helix 24
AC6
B
394 408Right-handed alpha
Helix 25
AC7
B
412 425Right-handed alpha
Helix 26
AC8
B
428 443Right-handed alpha
Helix 27
AC9
B
444 459Right-handed alpha
Helix 28
AD1
B
462 476Right-handed alpha
Helix 29
AD2
B
481 499Right-handed alpha
Helix 30
AD3
B
506 511Right-handed alpha
Helix 31
AD4
B
516 536Right-handed alpha
Helix 32
AD5
B
568 575Right-handed alpha
Helix 33
AD6
B
599 609Right-handed alpha
Helix 34
AD7
B
620 630Right-handed alpha
Helix 35
AD8
B
648 654Right-handed alpha
Helix 36
AD9
B
688 692Right-handed 310
Helix 37
AE1
B
707 712Right-handed alpha
Helix 38
AE2
B
713 717Right-handed 310
Helix 39
AE3
B
738 742Right-handed 310
Helix 40
AE4
B
743 748Right-handed alpha
Helix 41
AE5
B
769 771Right-handed 310
Helix 42
AE6
B
780 793Right-handed alpha
Helix 43
AE7
B
808 813Right-handed 310
Helix 44
AE8
B
814 819Right-handed alpha
Helix 45
AE9
B
833 836Right-handed 310
Helix 46
AF1
B
854 868Right-handed alpha
Helix 47
AF2
B
881 893Right-handed alpha
Helix 48
AF3
B
907 918Right-handed alpha
Helix 49
AF4
B
929 940Right-handed alpha
Helix 50
AF5
B
950 964Right-handed alpha
Helix 51
AF6
B
965 969Right-handed 310
Helix 52
AF7
B
972 987Right-handed alpha
Helix 53
AF8
B
988 1004Right-handed alpha
Helix 54
AF9
B
1008 1028Right-handed alpha
Helix 55
AG1
A
26 35Right-handed alpha
Helix 56
AG2
A
37 49Right-handed alpha
Helix 57
AG3
A
55 68Right-handed alpha
Helix 58
AG4
A
70 85Right-handed alpha
Helix 59
AG5
A
88 102Right-handed alpha
Helix 60
AG6
A
104 119Right-handed alpha
Helix 61
AG7
A
123 137Right-handed alpha
Helix 62
AG8
A
138 153Right-handed alpha
Helix 63
AG9
A
156 170Right-handed alpha
Helix 64
AH1
A
172 187Right-handed alpha
Helix 65
AH2
A
191 205Right-handed alpha
Helix 66
AH3
A
206 221Right-handed alpha
Helix 67
AH4
A
224 238Right-handed alpha
Helix 68
AH5
A
240 255Right-handed alpha
Helix 69
AH6
A
258 273Right-handed alpha
Helix 70
AH7
A
274 289Right-handed alpha
Helix 71
AH8
A
292 307Right-handed alpha
Helix 72
AH9
A
308 310Right-handed 310
Helix 73
AI1
A
311 323Right-handed alpha
Helix 74
AI2
A
326 340Right-handed alpha
Helix 75
AI3
A
342 357Right-handed alpha
Helix 76
AI4
A
360 374Right-handed alpha
Helix 77
AI5
A
377 391Right-handed alpha
Helix 78
AI6
A
394 408Right-handed alpha
Helix 79
AI7
A
412 425Right-handed alpha
Helix 80
AI8
A
428 443Right-handed alpha
Helix 81
AI9
A
444 459Right-handed alpha
Helix 82
AJ1
A
462 476Right-handed alpha
Helix 83
AJ2
A
481 499Right-handed alpha
Helix 84
AJ3
A
506 511Right-handed alpha
Helix 85
AJ4
A
516 536Right-handed alpha
Helix 86
AJ5
A
568 575Right-handed alpha
Helix 87
AJ6
A
599 609Right-handed alpha
Helix 88
AJ7
A
620 630Right-handed alpha
Helix 89
AJ8
A
648 654Right-handed alpha
Helix 90
AJ9
A
688 692Right-handed 310
Helix 91
AK1
A
707 712Right-handed alpha
Helix 92
AK2
A
713 717Right-handed 310
Helix 93
AK3
A
738 742Right-handed 310
Helix 94
AK4
A
743 748Right-handed alpha
Helix 95
AK5
A
769 771Right-handed 310
Helix 96
AK6
A
780 793Right-handed alpha
Helix 97
AK7
A
808 813Right-handed 310
Helix 98
AK8
A
814 819Right-handed alpha
Helix 99
AK9
A
833 836Right-handed 310
Helix 100
AL1
A
854 868Right-handed alpha
Helix 101
AL2
A
881 893Right-handed alpha
Helix 102
AL3
A
907 918Right-handed alpha
Helix 103
AL4
A
929 940Right-handed alpha
Helix 104
AL5
A
950 964Right-handed alpha
Helix 105
AL6
A
965 969Right-handed 310
Helix 106
AL7
A
972 987Right-handed alpha
Helix 107
AL8
A
988 1004Right-handed alpha
Helix 108
AL9
A
1008 1028Right-handed alpha
Helix 109
AM1
C
74 87Right-handed alpha
Helix 110
AM2
C
112 129Right-handed alpha
Helix 111
AM3
C
147 164Right-handed alpha
Helix 112
AM4
C
181 188Right-handed alpha
Helix 113
AM5
C
190 206Right-handed alpha
Helix 114
AM6
C
227 230Right-handed 310
Helix 115
AM7
C
231 241Right-handed alpha
Helix 116
AM8
C
260 272Right-handed alpha
Helix 117
AM9
C
302 307Right-handed alpha
Helix 118
AN1
C
317 333Right-handed alpha
Helix 119
AN2
C
376 391Right-handed alpha
Helix 120
AN3
C
394 398Right-handed 310
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There are 9 sheets in PDB entry 7YEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
611 612first strand
Strand 2
B
586 592parallel
Strand 3
B
556 562parallel
Strand 4
B
635 638parallel
Strand 5
B
658 661parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
720 721first strand
Strand 2
B
773 777parallel
Strand 3
B
753 755anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
734 737first strand
Strand 2
B
827 831anti-parallel
Strand 3
B
802 806parallel
Strand 4
B
796 799anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
900 903first strand
Strand 2
B
871 876parallel
Strand 3
B
842 845parallel
Strand 4
B
920 922parallel
Strand 5
B
943 944parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 612first strand
Strand 2
A
586 592parallel
Strand 3
A
556 562parallel
Strand 4
A
635 638parallel
Strand 5
A
658 661parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 721first strand
Strand 2
A
773 777parallel
Strand 3
A
753 755anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 737first strand
Strand 2
A
827 831anti-parallel
Strand 3
A
802 806parallel
Strand 4
A
796 799anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
900 903first strand
Strand 2
A
871 876parallel
Strand 3
A
842 845parallel
Strand 4
A
920 922parallel
Strand 5
A
943 944parallel
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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 66first strand
Strand 2
C
92 95parallel
Strand 3
C
132 137parallel
Strand 4
C
169 172parallel
Strand 5
C
213 215parallel
Strand 6
C
246 249parallel
Strand 7
C
276 279parallel
Strand 8
C
309 312parallel
Strand 9
C
61 66parallel
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