Analysis of interatomic Contacts of Structural Units in PDB entry:
7YEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YEO entry

There are 2 chains in PDB entry 7YEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 13SER 398
B
 LYS 13SER 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7YEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 23Right-handed alpha
Helix 2
AA2
A
24 28Right-handed 310
Helix 3
AA3
A
71 86Right-handed alpha
Helix 4
AA4
A
94 107Right-handed alpha
Helix 5
AA5
A
121 136Right-handed alpha
Helix 6
AA6
A
169 181Right-handed alpha
Helix 7
AA7
A
229 244Right-handed alpha
Helix 8
AA8
A
248 286Right-handed alpha
Helix 9
AA9
A
286 293Right-handed alpha
Helix 10
AB1
A
296 298Right-handed 310
Helix 11
AB2
A
305 309Right-handed 310
Helix 12
AB3
A
312 318Right-handed alpha
Helix 13
AB4
A
332 343Right-handed alpha
Helix 14
AB5
A
363 365Right-handed 310
Helix 15
AB6
A
382 397Right-handed alpha
Helix 16
AB7
B
15 23Right-handed alpha
Helix 17
AB8
B
24 28Right-handed 310
Helix 18
AB9
B
71 86Right-handed alpha
Helix 19
AC1
B
94 107Right-handed alpha
Helix 20
AC2
B
121 136Right-handed alpha
Helix 21
AC3
B
169 181Right-handed alpha
Helix 22
AC4
B
229 244Right-handed alpha
Helix 23
AC5
B
248 286Right-handed alpha
Helix 24
AC6
B
286 293Right-handed alpha
Helix 25
AC7
B
296 298Right-handed 310
Helix 26
AC8
B
305 309Right-handed 310
Helix 27
AC9
B
312 318Right-handed alpha
Helix 28
AD1
B
332 343Right-handed alpha
Helix 29
AD2
B
363 365Right-handed 310
Helix 30
AD3
B
382 397Right-handed alpha
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There are 4 sheets in PDB entry 7YEO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
223 226anti-parallel
Strand 3
A
205 209anti-parallel
Strand 4
A
183 187parallel
Strand 5
A
154 158parallel
Strand 6
A
110 113parallel
Strand 7
A
138 141parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 303first strand
Strand 2
A
325 330anti-parallel
Strand 3
A
373 377anti-parallel
Strand 4
A
357 361anti-parallel
Strand 5
A
346 348parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 92first strand
Strand 2
B
223 226anti-parallel
Strand 3
B
205 209anti-parallel
Strand 4
B
183 187parallel
Strand 5
B
154 158parallel
Strand 6
B
110 113parallel
Strand 7
B
138 141parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 303first strand
Strand 2
B
325 330anti-parallel
Strand 3
B
373 377anti-parallel
Strand 4
B
357 361anti-parallel
Strand 5
B
346 348parallel
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