Analysis of interatomic Contacts of Structural Units in PDB entry:
7YET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YET entry

There are 5 chains in PDB entry 7YET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 8CYS 1352
B
 HIS 81ILE 340
C
 HIS 81SER 179
D
 SER 82THR 149
E
 ASN 80VAL 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7YET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 29Right-handed alpha
Helix 2
AA2
A
38 43Right-handed 310
Helix 3
AA3
A
51 55Right-handed 310
Helix 4
AA4
A
56 63Right-handed alpha
Helix 5
AA5
A
76 84Right-handed alpha
Helix 6
AA6
A
100 112Right-handed alpha
Helix 7
AA7
A
113 122Right-handed alpha
Helix 8
AA8
A
132 142Right-handed alpha
Helix 9
AA9
A
146 166Right-handed alpha
Helix 10
AB1
A
168 170Right-handed 310
Helix 11
AB2
A
196 198Right-handed 310
Helix 12
AB3
A
216 221Right-handed alpha
Helix 13
AB4
A
235 261Right-handed alpha
Helix 14
AB5
A
271 288Right-handed alpha
Helix 15
AB6
A
291 296Right-handed alpha
Helix 16
AB7
A
297 308Right-handed alpha
Helix 17
AB8
A
317 334Right-handed alpha
Helix 18
AB9
A
341 348Right-handed alpha
Helix 19
AC1
A
350 357Right-handed alpha
Helix 20
AC2
A
361 369Right-handed alpha
Helix 21
AC3
A
381 392Right-handed alpha
Helix 22
AC4
A
400 422Right-handed alpha
Helix 23
AC5
A
432 436Right-handed 310
Helix 24
AC6
A
439 445Right-handed alpha
Helix 25
AC7
A
450 454Right-handed 310
Helix 26
AC8
A
458 464Right-handed 310
Helix 27
AC9
A
490 498Right-handed 310
Helix 28
AD1
A
527 537Right-handed alpha
Helix 29
AD2
A
538 542Right-handed 310
Helix 30
AD3
A
567 584Right-handed alpha
Helix 31
AD4
A
634 640Right-handed 310
Helix 32
AD5
A
641 656Right-handed alpha
Helix 33
AD6
A
663 669Right-handed alpha
Helix 34
AD7
A
688 692Right-handed 310
Helix 35
AD8
A
712 731Right-handed alpha
Helix 36
AD9
A
758 783Right-handed alpha
Helix 37
AE1
A
788 792Right-handed 310
Helix 38
AE2
A
815 820Right-handed alpha
Helix 39
AE3
A
832 850Right-handed alpha
Helix 40
AE4
A
854 875Right-handed alpha
Helix 41
AE5
A
884 889Right-handed alpha
Helix 42
AE6
A
895 903Right-handed alpha
Helix 43
AE7
A
916 921Right-handed 310
Helix 44
AE8
A
927 943Right-handed alpha
Helix 45
AE9
A
949 954Right-handed alpha
Helix 46
AF1
A
963 968Right-handed alpha
Helix 47
AF2
A
974 978Right-handed 310
Helix 48
AF3
A
1069 1085Right-handed alpha
Helix 49
AF4
A
1315 1331Right-handed alpha
Helix 50
AF5
A
1335 1339Right-handed 310
Helix 51
AF6
B
82 117Right-handed alpha
Helix 52
AF7
B
118 125Right-handed alpha
Helix 53
AF8
B
125 148Right-handed alpha
Helix 54
AF9
B
155 165Right-handed alpha
Helix 55
AG1
B
177 187Right-handed alpha
Helix 56
AG2
B
193 206Right-handed alpha
Helix 57
AG3
B
220 230Right-handed alpha
Helix 58
AG4
B
237 254Right-handed alpha
Helix 59
AG5
B
255 270Right-handed alpha
Helix 60
AG6
B
272 284Right-handed alpha
Helix 61
AG7
B
306 309Right-handed 310
Helix 62
AG8
C
82 118Right-handed alpha
Helix 63
AG9
C
120 142Right-handed alpha
Helix 64
AH1
C
152 165Right-handed alpha
Helix 65
AH2
D
83 112Right-handed alpha
Helix 66
AH3
D
114 146Right-handed alpha
Helix 67
AH4
E
81 144Right-handed alpha
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There are 6 sheets in PDB entry 7YET. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
180 185anti-parallel
Strand 3
A
188 194anti-parallel
Strand 4
A
227 233anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
C
146 148anti-parallel
Strand 3
B
174 176anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 565first strand
Strand 2
A
549 552anti-parallel
Strand 3
A
675 676parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 632first strand
Strand 2
A
743 749anti-parallel
Strand 3
A
734 740anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 801first strand
Strand 2
A
804 807anti-parallel
Strand 3
A
810 811anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
294 297first strand
Strand 2
B
324 330parallel
Strand 3
B
335 339anti-parallel
Strand 4
B
311 312anti-parallel
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