Analysis of interatomic Contacts of Structural Units in PDB entry:
7YG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YG1 entry

There are 2 chains in PDB entry 7YG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 617CYS 1020
B
 GLN 617CYS 1020
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7YG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
620 631Right-handed alpha
Helix 2
AA2
A
632 634Right-handed 310
Helix 3
AA3
A
655 665Right-handed alpha
Helix 4
AA4
A
686 703Right-handed alpha
Helix 5
AA5
A
716 726Right-handed alpha
Helix 6
AA6
A
752 767Right-handed alpha
Helix 7
AA7
A
816 825Right-handed alpha
Helix 8
AA8
A
840 844Right-handed 310
Helix 9
AA9
A
845 852Right-handed alpha
Helix 10
AB1
A
854 858Right-handed 310
Helix 11
AB2
A
875 884Right-handed alpha
Helix 12
AB3
A
896 901Right-handed 310
Helix 13
AB4
A
904 914Right-handed alpha
Helix 14
AB5
A
921 923Right-handed 310
Helix 15
AB6
A
924 934Right-handed alpha
Helix 16
AB7
A
949 966Right-handed alpha
Helix 17
AB8
A
986 998Right-handed alpha
Helix 18
AB9
B
618 628Right-handed alpha
Helix 19
AC1
B
655 665Right-handed alpha
Helix 20
AC2
B
687 703Right-handed alpha
Helix 21
AC3
B
717 728Right-handed alpha
Helix 22
AC4
B
730 734Right-handed 310
Helix 23
AC5
B
750 767Right-handed alpha
Helix 24
AC6
B
812 820Right-handed alpha
Helix 25
AC7
B
821 824Right-handed 310
Helix 26
AC8
B
841 852Right-handed alpha
Helix 27
AC9
B
853 859Right-handed 310
Helix 28
AD1
B
872 886Right-handed alpha
Helix 29
AD2
B
896 900Right-handed 310
Helix 30
AD3
B
904 914Right-handed alpha
Helix 31
AD4
B
924 935Right-handed alpha
Helix 32
AD5
B
949 965Right-handed alpha
Helix 33
AD6
B
986 998Right-handed alpha
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There are 2 sheets in PDB entry 7YG1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 713first strand
Strand 2
A
672 678parallel
Strand 3
A
645 648parallel
Strand 4
A
737 741parallel
Strand 5
A
770 775parallel
Strand 6
A
1005 1006anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
708 712first strand
Strand 2
B
672 677parallel
Strand 3
B
645 648parallel
Strand 4
B
737 740parallel
Strand 5
B
770 775parallel
Strand 6
B
1005 1009anti-parallel
Strand 7
B
973 976parallel
Strand 8
B
832 834parallel
Strand 9
B
862 863parallel
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