Analysis of interatomic Contacts of Structural Units in PDB entry:
7YH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YH5 entry

There are 6 chains in PDB entry 7YH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 176
B
 MET 1ARG 177
C
 MET 1ASN 176
D
 MET 1ASN 176
E
 MET 1GLY 175
F
 ARG 9GLY 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7YH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed 310
Helix 2
AA2
A
34 40Right-handed alpha
Helix 3
AA3
A
62 71Right-handed alpha
Helix 4
AA4
A
84 101Right-handed alpha
Helix 5
AA5
A
101 107Right-handed alpha
Helix 6
AA6
A
108 128Right-handed alpha
Helix 7
AA7
A
131 155Right-handed alpha
Helix 8
AA8
A
162 176Right-handed alpha
Helix 9
AA9
B
17 23Right-handed 310
Helix 10
AB1
B
34 40Right-handed alpha
Helix 11
AB2
B
62 71Right-handed alpha
Helix 12
AB3
B
84 101Right-handed alpha
Helix 13
AB4
B
101 107Right-handed alpha
Helix 14
AB5
B
108 130Right-handed alpha
Helix 15
AB6
B
131 155Right-handed alpha
Helix 16
AB7
B
162 175Right-handed alpha
Helix 17
AB8
C
17 24Right-handed 310
Helix 18
AB9
C
34 40Right-handed alpha
Helix 19
AC1
C
62 71Right-handed alpha
Helix 20
AC2
C
85 101Right-handed alpha
Helix 21
AC3
C
101 107Right-handed alpha
Helix 22
AC4
C
109 111Right-handed 310
Helix 23
AC5
C
112 128Right-handed alpha
Helix 24
AC6
C
131 155Right-handed alpha
Helix 25
AC7
C
162 172Right-handed alpha
Helix 26
AC8
D
17 23Right-handed 310
Helix 27
AC9
D
34 40Right-handed alpha
Helix 28
AD1
D
62 71Right-handed alpha
Helix 29
AD2
D
84 100Right-handed alpha
Helix 30
AD3
D
101 107Right-handed alpha
Helix 31
AD4
D
108 129Right-handed alpha
Helix 32
AD5
D
131 154Right-handed alpha
Helix 33
AD6
D
162 176Right-handed alpha
Helix 34
AD7
E
15 19Right-handed 310
Helix 35
AD8
E
34 40Right-handed alpha
Helix 36
AD9
E
62 71Right-handed alpha
Helix 37
AE1
E
87 97Right-handed alpha
Helix 38
AE2
E
112 128Right-handed alpha
Helix 39
AE3
E
131 153Right-handed alpha
Helix 40
AE4
E
154 156Right-handed 310
Helix 41
AE5
E
162 175Right-handed alpha
Helix 42
AE6
F
90 101Right-handed alpha
Helix 43
AE7
F
101 107Right-handed alpha
Helix 44
AE8
F
115 128Right-handed alpha
Helix 45
AE9
F
131 153Right-handed alpha
Helix 46
AF1
F
162 173Right-handed alpha
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There are 7 sheets in PDB entry 7YH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
54 57parallel
Strand 3
A
2 5parallel
Strand 4
A
74 77parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
B
13 15anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
26 28parallel
Strand 3
B
54 57parallel
Strand 4
B
2 5parallel
Strand 5
B
74 77parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 45first strand
Strand 2
C
26 28parallel
Strand 3
C
54 57parallel
Strand 4
C
2 5parallel
Strand 5
C
74 77parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 15first strand
Strand 2
D
13 15anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 44first strand
Strand 2
D
26 28parallel
Strand 3
D
54 57parallel
Strand 4
D
2 5parallel
Strand 5
D
74 77parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 5first strand
Strand 2
E
54 57parallel
Strand 3
E
26 28parallel
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