Analysis of interatomic Contacts of Structural Units in PDB entry:
7YHL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YHL entry

There are 2 chains in PDB entry 7YHL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ILE 178
B
 VAL 2ILE 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7YHL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
39 57Right-handed alpha
Helix 3
AA3
A
78 93Right-handed alpha
Helix 4
AA4
A
105 119Right-handed alpha
Helix 5
AA5
A
129 140Right-handed alpha
Helix 6
AA6
A
151 155Right-handed 310
Helix 7
AA7
A
156 161Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
B
14 26Right-handed alpha
Helix 10
AB1
B
39 55Right-handed alpha
Helix 11
AB2
B
78 92Right-handed alpha
Helix 12
AB3
B
105 119Right-handed alpha
Helix 13
AB4
B
129 141Right-handed alpha
Helix 14
AB5
B
159 164Right-handed alpha
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There are 2 sheets in PDB entry 7YHL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
29 36parallel
Strand 3
A
2 7parallel
Strand 4
A
98 100parallel
Strand 5
A
122 127parallel
Strand 6
A
172 176anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 70first strand
Strand 2
B
31 36parallel
Strand 3
B
4 7parallel
Strand 4
B
98 100parallel
Strand 5
B
122 127parallel
Strand 6
B
172 176anti-parallel
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