Analysis of interatomic Contacts of Structural Units in PDB entry:
7YI0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YI0 entry

There are 6 chains in PDB entry 7YI0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 664	LEU 1322
B	ASP 17	LYS 384
C	ILE 220	MET 401
D	LYS 107	LYS 565
F	PHE 262	ALA 567
E	SER 221	PHE 374

There are 74 helices in PDB entry 7YI0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	664	666	Right-handed 310
Helix 2	AA2	A	667	677	Right-handed alpha
Helix 3	AA3	A	678	694	Right-handed alpha
Helix 4	AA4	A	698	711	Right-handed alpha
Helix 5	AA5	A	714	725	Right-handed alpha
Helix 6	AA6	A	759	763	Right-handed 310
Helix 7	AA7	A	771	778	Right-handed alpha
Helix 8	AA8	A	785	790	Right-handed alpha
Helix 9	AA9	A	801	837	Right-handed alpha
Helix 10	AB1	A	860	871	Right-handed alpha
Helix 11	AB2	A	875	884	Right-handed alpha
Helix 12	AB3	A	891	928	Right-handed alpha
Helix 13	AB4	A	934	943	Right-handed alpha
Helix 14	AB5	A	944	961	Right-handed alpha
Helix 15	AB6	A	982	999	Right-handed alpha
Helix 16	AB7	A	1003	1022	Right-handed alpha
Helix 17	AB8	A	1027	1031	Right-handed 310
Helix 18	AB9	A	1141	1163	Right-handed alpha
Helix 19	AC1	A	1164	1174	Right-handed alpha
Helix 20	AC2	A	1202	1217	Right-handed alpha
Helix 21	AC3	A	1220	1233	Right-handed alpha
Helix 22	AC4	A	1236	1240	Right-handed 310
Helix 23	AC5	A	1241	1256	Right-handed alpha
Helix 24	AC6	A	1259	1276	Right-handed alpha
Helix 25	AC7	A	1280	1294	Right-handed alpha
Helix 26	AC8	B	28	32	Right-handed 310
Helix 27	AC9	B	42	55	Right-handed alpha
Helix 28	AD1	B	56	59	Right-handed 310
Helix 29	AD2	B	70	75	Right-handed alpha
Helix 30	AD3	B	79	89	Right-handed alpha
Helix 31	AD4	B	93	97	Right-handed 310
Helix 32	AD5	B	98	105	Right-handed alpha
Helix 33	AD6	B	115	136	Right-handed alpha
Helix 34	AD7	B	164	175	Right-handed alpha
Helix 35	AD8	B	190	197	Right-handed alpha
Helix 36	AD9	B	226	230	Right-handed 310
Helix 37	AE1	B	243	263	Right-handed alpha
Helix 38	AE2	B	272	276	Right-handed 310
Helix 39	AE3	B	287	300	Right-handed alpha
Helix 40	AE4	B	314	330	Right-handed alpha
Helix 41	AE5	B	343	347	Right-handed 310
Helix 42	AE6	B	365	381	Right-handed alpha
Helix 43	AE7	C	225	241	Right-handed alpha
Helix 44	AE8	C	253	267	Right-handed alpha
Helix 45	AE9	C	271	297	Right-handed alpha
Helix 46	AF1	C	299	315	Right-handed alpha
Helix 47	AF2	C	321	325	Right-handed 310
Helix 48	AF3	C	333	336	Right-handed 310
Helix 49	AF4	C	337	344	Right-handed alpha
Helix 50	AF5	C	348	369	Right-handed alpha
Helix 51	AF6	C	391	401	Right-handed alpha
Helix 52	AF7	D	120	128	Right-handed alpha
Helix 53	AF8	D	168	175	Right-handed 310
Helix 54	AF9	D	303	312	Right-handed alpha
Helix 55	AG1	D	317	330	Right-handed alpha
Helix 56	AG2	D	336	342	Right-handed alpha
Helix 57	AG3	D	357	361	Right-handed 310
Helix 58	AG4	D	402	407	Right-handed 310
Helix 59	AG5	D	430	434	Right-handed 310
Helix 60	AG6	D	543	565	Right-handed alpha
Helix 61	AG7	F	307	314	Right-handed alpha
Helix 62	AG8	F	321	330	Right-handed alpha
Helix 63	AG9	F	331	334	Right-handed 310
Helix 64	AH1	F	336	344	Right-handed alpha
Helix 65	AH2	F	546	567	Right-handed alpha
Helix 66	AH3	E	225	241	Right-handed alpha
Helix 67	AH4	E	253	266	Right-handed alpha
Helix 68	AH5	E	267	269	Right-handed 310
Helix 69	AH6	E	271	297	Right-handed alpha
Helix 70	AH7	E	299	317	Right-handed alpha
Helix 71	AH8	E	321	325	Right-handed 310
Helix 72	AH9	E	329	335	Right-handed alpha
Helix 73	AI1	E	337	344	Right-handed alpha
Helix 74	AI2	E	350	369	Right-handed alpha

There are 9 sheets in PDB entry 7YI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	756	757	first strand
Strand 2	A	782	783	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	975	978	first strand
Strand 2	A	1311	1317	anti-parallel
Strand 3	A	1300	1306	anti-parallel
Strand 4	A	1136	1140	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	238	first strand
Strand 2	B	203	210	parallel
Strand 3	B	180	184	parallel
Strand 4	B	266	270	parallel
Strand 5	B	305	308	parallel
Strand 6	B	141	144	parallel
Strand 7	B	21	24	parallel
Strand 8	B	61	66	parallel
Strand 9	D	177	179	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	246	first strand
Strand 2	C	387	389	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	274	first strand
Strand 2	D	281	282	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	365	366	first strand
Strand 2	D	372	373	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	476	first strand
Strand 2	D	490	493	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	505	506	first strand
Strand 2	D	539	541	parallel
Strand 3	D	520	521	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	273	274	first strand
Strand 2	F	281	282	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YI0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YI0