Analysis of interatomic Contacts of Structural Units in PDB entry:
7YIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YIC entry

There are 2 chains in PDB entry 7YIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLN 251
B
 ALA 2GLN 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7YIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
68 83Right-handed alpha
Helix 4
AA4
A
105 117Right-handed alpha
Helix 5
AA5
A
117 134Right-handed alpha
Helix 6
AA6
A
144 148Right-handed 310
Helix 7
AA7
A
154 175Right-handed alpha
Helix 8
AA8
A
192 198Right-handed alpha
Helix 9
AA9
A
200 210Right-handed alpha
Helix 10
AB1
A
218 230Right-handed alpha
Helix 11
AB2
A
231 235Right-handed 310
Helix 12
AB3
B
18 31Right-handed alpha
Helix 13
AB4
B
41 55Right-handed alpha
Helix 14
AB5
B
68 83Right-handed alpha
Helix 15
AB6
B
105 117Right-handed alpha
Helix 16
AB7
B
117 134Right-handed alpha
Helix 17
AB8
B
144 148Right-handed 310
Helix 18
AB9
B
154 175Right-handed alpha
Helix 19
AC1
B
192 198Right-handed alpha
Helix 20
AC2
B
200 210Right-handed alpha
Helix 21
AC3
B
218 230Right-handed alpha
Helix 22
AC4
B
231 235Right-handed 310
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There are 2 sheets in PDB entry 7YIC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
34 39parallel
Strand 3
A
10 13parallel
Strand 4
A
85 90parallel
Strand 5
A
137 142parallel
Strand 6
A
180 187parallel
Strand 7
A
241 244parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
34 39parallel
Strand 3
B
10 13parallel
Strand 4
B
85 90parallel
Strand 5
B
137 142parallel
Strand 6
B
180 187parallel
Strand 7
B
241 244parallel
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