Analysis of interatomic Contacts of Structural Units in PDB entry:
7YIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YIM entry

There is 1 chain in PDB entry 7YIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 18VAL 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7YIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 34Right-handed 310
Helix 2
AA2
A
42 55Right-handed alpha
Helix 3
AA3
A
59 75Right-handed alpha
Helix 4
AA4
A
90 101Right-handed alpha
Helix 5
AA5
A
101 108Right-handed alpha
Helix 6
AA6
A
111 116Right-handed 310
Helix 7
AA7
A
117 128Right-handed alpha
Helix 8
AA8
A
143 154Right-handed alpha
Helix 9
AA9
A
154 168Right-handed alpha
Helix 10
AB1
A
174 193Right-handed alpha
Helix 11
AB2
A
197 231Right-handed alpha
Helix 12
AB3
A
231 247Right-handed alpha
Helix 13
AB4
A
251 271Right-handed alpha
Helix 14
AB5
A
273 290Right-handed alpha
Helix 15
AB6
A
301 305Right-handed 310
Helix 16
AB7
A
306 317Right-handed alpha
Helix 17
AB8
A
343 361Right-handed alpha
Helix 18
AB9
A
366 385Right-handed alpha
Helix 19
AC1
A
389 399Right-handed alpha
Helix 20
AC2
A
402 439Right-handed alpha
Helix 21
AC3
A
443 462Right-handed alpha
Helix 22
AC4
A
467 491Right-handed alpha
Helix 23
AC5
A
494 503Right-handed alpha
Helix 24
AC6
A
507 514Right-handed alpha
Helix 25
AC7
A
527 531Right-handed 310
Helix 26
AC8
A
542 560Right-handed alpha
Helix 27
AC9
A
565 582Right-handed alpha
Helix 28
AD1
A
587 608Right-handed alpha
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There are no sheets in PDB entry 7YIM
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