Analysis of interatomic Contacts of Structural Units in PDB entry:
7YN0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YN0 entry

There are 3 chains in PDB entry 7YN0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 19	LEU 1223
B	VAL 19	LEU 1223
C	VAL 19	LEU 1223

There are 87 helices in PDB entry 7YN0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	41	Right-handed alpha
Helix 2	AA2	A	49	53	Right-handed 310
Helix 3	AA3	A	104	108	Right-handed 310
Helix 4	AA4	A	222	230	Right-handed alpha
Helix 5	AA5	A	303	307	Right-handed 310
Helix 6	AA6	A	342	350	Right-handed alpha
Helix 7	AA7	A	385	390	Right-handed alpha
Helix 8	AA8	A	395	399	Right-handed 310
Helix 9	AA9	A	410	415	Right-handed alpha
Helix 10	AB1	A	431	436	Right-handed alpha
Helix 11	AB2	A	449	457	Right-handed 310
Helix 12	AB3	A	462	468	Right-handed alpha
Helix 13	AB4	A	524	529	Right-handed 310
Helix 14	AB5	A	546	550	Right-handed 310
Helix 15	AB6	A	596	600	Right-handed 310
Helix 16	AB7	A	805	812	Right-handed alpha
Helix 17	AB8	A	814	822	Right-handed alpha
Helix 18	AB9	A	825	853	Right-handed alpha
Helix 19	AC1	A	888	898	Right-handed alpha
Helix 20	AC2	A	907	914	Right-handed alpha
Helix 21	AC3	A	925	930	Right-handed alpha
Helix 22	AC4	A	940	959	Right-handed alpha
Helix 23	AC5	A	971	983	Right-handed alpha
Helix 24	AC6	A	986	993	Right-handed alpha
Helix 25	AC7	A	993	1008	Right-handed alpha
Helix 26	AC8	A	1016	1039	Right-handed alpha
Helix 27	AC9	A	1050	1058	Right-handed alpha
Helix 28	AD1	A	1059	1106	Right-handed alpha
Helix 29	AD2	A	1198	1200	Right-handed 310
Helix 30	AD3	B	36	41	Right-handed alpha
Helix 31	AD4	B	49	53	Right-handed 310
Helix 32	AD5	B	104	108	Right-handed 310
Helix 33	AD6	B	222	230	Right-handed alpha
Helix 34	AD7	B	303	307	Right-handed 310
Helix 35	AD8	B	342	350	Right-handed alpha
Helix 36	AD9	B	385	390	Right-handed alpha
Helix 37	AE1	B	395	399	Right-handed 310
Helix 38	AE2	B	410	415	Right-handed alpha
Helix 39	AE3	B	431	436	Right-handed alpha
Helix 40	AE4	B	449	457	Right-handed 310
Helix 41	AE5	B	462	468	Right-handed alpha
Helix 42	AE6	B	524	529	Right-handed 310
Helix 43	AE7	B	546	550	Right-handed 310
Helix 44	AE8	B	596	600	Right-handed 310
Helix 45	AE9	B	805	812	Right-handed alpha
Helix 46	AF1	B	814	822	Right-handed alpha
Helix 47	AF2	B	825	853	Right-handed alpha
Helix 48	AF3	B	888	898	Right-handed alpha
Helix 49	AF4	B	907	914	Right-handed alpha
Helix 50	AF5	B	925	930	Right-handed alpha
Helix 51	AF6	B	940	959	Right-handed alpha
Helix 52	AF7	B	971	983	Right-handed alpha
Helix 53	AF8	B	986	993	Right-handed alpha
Helix 54	AF9	B	993	1008	Right-handed alpha
Helix 55	AG1	B	1016	1039	Right-handed alpha
Helix 56	AG2	B	1050	1058	Right-handed alpha
Helix 57	AG3	B	1059	1106	Right-handed alpha
Helix 58	AG4	B	1198	1200	Right-handed 310
Helix 59	AG5	C	36	41	Right-handed alpha
Helix 60	AG6	C	49	53	Right-handed 310
Helix 61	AG7	C	104	108	Right-handed 310
Helix 62	AG8	C	222	230	Right-handed alpha
Helix 63	AG9	C	303	307	Right-handed 310
Helix 64	AH1	C	342	350	Right-handed alpha
Helix 65	AH2	C	385	390	Right-handed alpha
Helix 66	AH3	C	395	399	Right-handed 310
Helix 67	AH4	C	410	415	Right-handed alpha
Helix 68	AH5	C	431	436	Right-handed alpha
Helix 69	AH6	C	449	457	Right-handed 310
Helix 70	AH7	C	462	468	Right-handed alpha
Helix 71	AH8	C	524	529	Right-handed 310
Helix 72	AH9	C	546	550	Right-handed 310
Helix 73	AI1	C	596	600	Right-handed 310
Helix 74	AI2	C	805	812	Right-handed alpha
Helix 75	AI3	C	814	822	Right-handed alpha
Helix 76	AI4	C	825	853	Right-handed alpha
Helix 77	AI5	C	888	898	Right-handed alpha
Helix 78	AI6	C	907	914	Right-handed alpha
Helix 79	AI7	C	925	930	Right-handed alpha
Helix 80	AI8	C	940	959	Right-handed alpha
Helix 81	AI9	C	971	983	Right-handed alpha
Helix 82	AJ1	C	986	993	Right-handed alpha
Helix 83	AJ2	C	993	1008	Right-handed alpha
Helix 84	AJ3	C	1016	1039	Right-handed alpha
Helix 85	AJ4	C	1050	1058	Right-handed alpha
Helix 86	AJ5	C	1059	1106	Right-handed alpha
Helix 87	AJ6	C	1198	1200	Right-handed 310

There are 54 sheets in PDB entry 7YN0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	75	first strand
Strand 2	A	319	327	anti-parallel
Strand 3	A	333	337	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	86	first strand
Strand 2	A	312	313	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	89	first strand
Strand 2	A	298	300	parallel
Strand 3	A	206	208	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	93	first strand
Strand 2	A	96	97	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	292	295	anti-parallel
Strand 3	A	147	150	anti-parallel
Strand 4	A	167	174	anti-parallel
Strand 5	A	179	189	anti-parallel
Strand 6	A	232	235	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	284	first strand
Strand 2	A	263	267	anti-parallel
Strand 3	A	252	258	anti-parallel
Strand 4	A	116	120	anti-parallel
Strand 5	A	316	317	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	129	first strand
Strand 2	A	137	141	anti-parallel
Strand 3	A	309	310	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	161	163	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	362	first strand
Strand 2	A	659	664	anti-parallel
Strand 3	A	669	675	anti-parallel
Strand 4	A	712	715	anti-parallel
Strand 5	A	708	709	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	603	608	parallel
Strand 3	A	611	619	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	638	642	anti-parallel
Strand 6	A	630	632	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	404	first strand
Strand 2	A	440	447	anti-parallel
Strand 3	A	568	576	anti-parallel
Strand 4	A	477	483	anti-parallel
Strand 5	A	419	426	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	515	first strand
Strand 2	A	497	506	anti-parallel
Strand 3	A	553	561	anti-parallel
Strand 4	A	539	544	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	724	first strand
Strand 2	A	758	762	parallel
Strand 3	A	735	738	anti-parallel
Strand 4	A	730	732	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	795	first strand
Strand 2	A	1134	1151	anti-parallel
Strand 3	A	1121	1129	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	804	first strand
Strand 2	A	932	934	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1155	1157	first strand
Strand 2	A	1212	1214	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1164	1167	first strand
Strand 2	A	1202	1205	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1170	1173	first strand
Strand 2	A	1185	1188	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	75	first strand
Strand 2	B	319	327	anti-parallel
Strand 3	B	333	337	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	86	first strand
Strand 2	B	312	313	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	89	first strand
Strand 2	B	298	300	parallel
Strand 3	B	206	208	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	93	first strand
Strand 2	B	96	97	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	292	295	anti-parallel
Strand 3	B	147	150	anti-parallel
Strand 4	B	167	174	anti-parallel
Strand 5	B	179	189	anti-parallel
Strand 6	B	232	235	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	284	first strand
Strand 2	B	263	267	anti-parallel
Strand 3	B	252	258	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	316	317	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	129	first strand
Strand 2	B	137	141	anti-parallel
Strand 3	B	309	310	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	161	163	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	362	first strand
Strand 2	B	659	664	anti-parallel
Strand 3	B	669	675	anti-parallel
Strand 4	B	712	715	anti-parallel
Strand 5	B	708	709	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	603	608	parallel
Strand 3	B	611	619	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	638	642	anti-parallel
Strand 6	B	630	632	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	404	first strand
Strand 2	B	440	447	anti-parallel
Strand 3	B	568	576	anti-parallel
Strand 4	B	477	483	anti-parallel
Strand 5	B	419	426	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	515	first strand
Strand 2	B	497	506	anti-parallel
Strand 3	B	553	561	anti-parallel
Strand 4	B	539	544	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	724	first strand
Strand 2	B	758	762	parallel
Strand 3	B	735	738	anti-parallel
Strand 4	B	730	732	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	778	795	first strand
Strand 2	B	1134	1151	anti-parallel
Strand 3	B	1121	1129	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	804	first strand
Strand 2	B	932	934	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1155	1157	first strand
Strand 2	B	1212	1214	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1164	1167	first strand
Strand 2	B	1202	1205	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1170	1173	first strand
Strand 2	B	1185	1188	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	75	first strand
Strand 2	C	319	327	anti-parallel
Strand 3	C	333	337	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	86	first strand
Strand 2	C	312	313	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	89	first strand
Strand 2	C	298	300	parallel
Strand 3	C	206	208	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	93	first strand
Strand 2	C	96	97	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	292	295	anti-parallel
Strand 3	C	147	150	anti-parallel
Strand 4	C	167	174	anti-parallel
Strand 5	C	179	189	anti-parallel
Strand 6	C	232	235	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	280	284	first strand
Strand 2	C	263	267	anti-parallel
Strand 3	C	252	258	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	316	317	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	129	first strand
Strand 2	C	137	141	anti-parallel
Strand 3	C	309	310	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	161	163	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	359	362	first strand
Strand 2	C	659	664	anti-parallel
Strand 3	C	669	675	anti-parallel
Strand 4	C	712	715	anti-parallel
Strand 5	C	708	709	anti-parallel

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There are 6 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	373	374	first strand
Strand 2	C	603	608	parallel
Strand 3	C	611	619	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	638	642	anti-parallel
Strand 6	C	630	632	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	400	404	first strand
Strand 2	C	440	447	anti-parallel
Strand 3	C	568	576	anti-parallel
Strand 4	C	477	483	anti-parallel
Strand 5	C	419	426	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	515	first strand
Strand 2	C	497	506	anti-parallel
Strand 3	C	553	561	anti-parallel
Strand 4	C	539	544	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	724	first strand
Strand 2	C	758	762	parallel
Strand 3	C	735	738	anti-parallel
Strand 4	C	730	732	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	778	795	first strand
Strand 2	C	1134	1151	anti-parallel
Strand 3	C	1121	1129	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	802	804	first strand
Strand 2	C	932	934	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1155	1157	first strand
Strand 2	C	1212	1214	parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1164	1167	first strand
Strand 2	C	1202	1205	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1170	1173	first strand
Strand 2	C	1185	1188	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YN0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YN0