Analysis of interatomic Contacts of Structural Units in PDB entry:
7YNK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YNK entry

There are 2 chains in PDB entry 7YNK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 26ALA 672
B
 GLN 28HIS 52
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7YNK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 40Right-handed alpha
Helix 2
AA2
A
65 76Right-handed alpha
Helix 3
AA3
A
77 92Right-handed alpha
Helix 4
AA4
A
95 121Right-handed alpha
Helix 5
AA5
A
124 133Right-handed alpha
Helix 6
AA6
A
135 153Right-handed alpha
Helix 7
AA7
A
153 168Right-handed alpha
Helix 8
AA8
A
173 191Right-handed alpha
Helix 9
AA9
A
192 224Right-handed alpha
Helix 10
AB1
A
225 233Right-handed alpha
Helix 11
AB2
A
234 236Right-handed 310
Helix 12
AB3
A
252 257Right-handed alpha
Helix 13
AB4
A
275 294Right-handed alpha
Helix 14
AB5
A
294 303Right-handed alpha
Helix 15
AB6
A
306 323Right-handed alpha
Helix 16
AB7
A
323 339Right-handed alpha
Helix 17
AB8
A
339 344Right-handed alpha
Helix 18
AB9
A
347 355Right-handed alpha
Helix 19
AC1
A
361 363Right-handed 310
Helix 20
AC2
A
364 374Right-handed alpha
Helix 21
AC3
A
378 414Right-handed alpha
Helix 22
AC4
A
418 440Right-handed alpha
Helix 23
AC5
A
440 447Right-handed alpha
Helix 24
AC6
A
451 477Right-handed alpha
Helix 25
AC7
A
481 507Right-handed alpha
Helix 26
AC8
A
518 524Right-handed alpha
Helix 27
AC9
A
527 546Right-handed alpha
Helix 28
AD1
A
553 557Right-handed 310
Helix 29
AD2
A
560 564Right-handed 310
Helix 30
AD3
A
648 672Right-handed alpha
Helix 31
AD4
B
29 52Right-handed alpha
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There are no sheets in PDB entry 7YNK
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