Analysis of interatomic Contacts of Structural Units in PDB entry:
7YR2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YR2 entry

There are 4 chains in PDB entry 7YR2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ASP 615
D	THR 25	GLU 1144
E	THR 25	GLU 1144
C	THR 25	GLU 1144

There are 76 helices in PDB entry 7YR2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	81	Right-handed alpha
Helix 3	AA3	A	92	101	Right-handed alpha
Helix 4	AA4	A	104	108	Right-handed 310
Helix 5	AA5	A	109	129	Right-handed alpha
Helix 6	AA6	A	146	155	Right-handed alpha
Helix 7	AA7	A	157	194	Right-handed alpha
Helix 8	AA8	A	198	205	Right-handed alpha
Helix 9	AA9	A	218	252	Right-handed alpha
Helix 10	AB1	A	275	279	Right-handed 310
Helix 11	AB2	A	293	301	Right-handed alpha
Helix 12	AB3	A	303	318	Right-handed alpha
Helix 13	AB4	A	324	331	Right-handed alpha
Helix 14	AB5	A	365	384	Right-handed alpha
Helix 15	AB6	A	399	413	Right-handed alpha
Helix 16	AB7	A	414	421	Right-handed alpha
Helix 17	AB8	A	431	446	Right-handed alpha
Helix 18	AB9	A	448	466	Right-handed alpha
Helix 19	AC1	A	472	484	Right-handed alpha
Helix 20	AC2	A	498	502	Right-handed 310
Helix 21	AC3	A	503	508	Right-handed alpha
Helix 22	AC4	A	512	533	Right-handed alpha
Helix 23	AC5	A	547	559	Right-handed alpha
Helix 24	AC6	A	565	575	Right-handed alpha
Helix 25	AC7	A	581	599	Right-handed alpha
Helix 26	AC8	D	294	303	Right-handed alpha
Helix 27	AC9	D	337	343	Right-handed alpha
Helix 28	AD1	D	366	371	Right-handed 310
Helix 29	AD2	D	417	422	Right-handed alpha
Helix 30	AD3	D	737	742	Right-handed alpha
Helix 31	AD4	D	746	754	Right-handed alpha
Helix 32	AD5	D	755	757	Right-handed 310
Helix 33	AD6	D	760	783	Right-handed alpha
Helix 34	AD7	D	816	826	Right-handed alpha
Helix 35	AD8	D	869	884	Right-handed alpha
Helix 36	AD9	D	886	890	Right-handed 310
Helix 37	AE1	D	897	908	Right-handed alpha
Helix 38	AE2	D	913	918	Right-handed alpha
Helix 39	AE3	D	919	941	Right-handed alpha
Helix 40	AE4	D	945	965	Right-handed alpha
Helix 41	AE5	D	976	983	Right-handed alpha
Helix 42	AE6	D	985	1033	Right-handed alpha
Helix 43	AE7	E	294	303	Right-handed alpha
Helix 44	AE8	E	338	343	Right-handed alpha
Helix 45	AE9	E	405	410	Right-handed 310
Helix 46	AF1	E	416	422	Right-handed alpha
Helix 47	AF2	E	737	742	Right-handed alpha
Helix 48	AF3	E	746	755	Right-handed alpha
Helix 49	AF4	E	759	783	Right-handed alpha
Helix 50	AF5	E	816	826	Right-handed alpha
Helix 51	AF6	E	851	855	Right-handed 310
Helix 52	AF7	E	869	884	Right-handed alpha
Helix 53	AF8	E	886	890	Right-handed 310
Helix 54	AF9	E	897	908	Right-handed alpha
Helix 55	AG1	E	912	941	Right-handed alpha
Helix 56	AG2	E	945	965	Right-handed alpha
Helix 57	AG3	E	976	984	Right-handed alpha
Helix 58	AG4	E	985	1032	Right-handed alpha
Helix 59	AG5	C	294	303	Right-handed alpha
Helix 60	AG6	C	338	343	Right-handed alpha
Helix 61	AG7	C	366	371	Right-handed 310
Helix 62	AG8	C	405	410	Right-handed 310
Helix 63	AG9	C	417	422	Right-handed alpha
Helix 64	AH1	C	737	742	Right-handed alpha
Helix 65	AH2	C	746	755	Right-handed alpha
Helix 66	AH3	C	760	783	Right-handed alpha
Helix 67	AH4	C	816	826	Right-handed alpha
Helix 68	AH5	C	850	854	Right-handed 310
Helix 69	AH6	C	869	884	Right-handed alpha
Helix 70	AH7	C	886	890	Right-handed 310
Helix 71	AH8	C	897	909	Right-handed alpha
Helix 72	AH9	C	913	941	Right-handed alpha
Helix 73	AI1	C	945	965	Right-handed alpha
Helix 74	AI2	C	966	968	Right-handed 310
Helix 75	AI3	C	976	981	Right-handed alpha
Helix 76	AI4	C	985	1033	Right-handed alpha

There are 53 sheets in PDB entry 7YR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	350	first strand
Strand 2	A	356	359	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	30	first strand
Strand 2	D	61	65	anti-parallel
Strand 3	D	265	267	anti-parallel
Strand 4	D	91	94	anti-parallel
Strand 5	D	192	193	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	551	554	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	55	first strand
Strand 2	D	271	279	anti-parallel
Strand 3	D	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	237	242	anti-parallel
Strand 3	D	101	106	anti-parallel
Strand 4	D	116	120	anti-parallel
Strand 5	D	129	131	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	318	first strand
Strand 2	D	593	599	anti-parallel
Strand 3	D	609	613	anti-parallel
Strand 4	D	650	651	anti-parallel
Strand 5	D	642	643	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	325	326	first strand
Strand 2	D	538	543	parallel
Strand 3	D	546	551	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	358	first strand
Strand 2	D	395	402	anti-parallel
Strand 3	D	508	515	anti-parallel
Strand 4	D	433	437	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	362	first strand
Strand 2	D	524	525	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	575	577	first strand
Strand 2	D	584	586	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	654	655	first strand
Strand 2	D	691	696	parallel
Strand 3	D	670	675	anti-parallel
Strand 4	D	664	667	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	702	704	first strand
Strand 2	E	788	790	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	715	first strand
Strand 2	D	1072	1077	anti-parallel
Strand 3	D	1094	1097	anti-parallel
Strand 4	D	1102	1105	anti-parallel
Strand 5	D	1113	1114	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	718	728	first strand
Strand 2	D	1059	1069	anti-parallel
Strand 3	D	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	735	first strand
Strand 2	D	859	861	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	787	788	first strand
Strand 2	C	701	702	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1088	1090	first strand
Strand 2	D	1120	1122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	30	first strand
Strand 2	E	61	64	anti-parallel
Strand 3	E	265	268	anti-parallel
Strand 4	E	90	94	anti-parallel
Strand 5	E	189	194	anti-parallel
Strand 6	E	204	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	55	first strand
Strand 2	E	271	279	anti-parallel
Strand 3	E	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	169	first strand
Strand 2	E	129	131	anti-parallel
Strand 3	E	116	120	anti-parallel
Strand 4	E	101	106	anti-parallel
Strand 5	E	239	242	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	311	319	first strand
Strand 2	E	592	599	anti-parallel
Strand 3	E	609	612	anti-parallel
Strand 4	E	650	651	anti-parallel
Strand 5	E	642	643	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	325	326	first strand
Strand 2	E	539	543	parallel
Strand 3	E	546	554	anti-parallel
Strand 4	E	584	588	anti-parallel
Strand 5	E	575	577	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	358	first strand
Strand 2	E	395	403	anti-parallel
Strand 3	E	507	515	anti-parallel
Strand 4	E	431	437	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	361	362	first strand
Strand 2	E	524	525	parallel
Strand 3	E	391	392	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	454	first strand
Strand 2	E	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	565	566	first strand
Strand 2	C	42	43	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	654	655	first strand
Strand 2	E	691	696	parallel
Strand 3	E	670	675	anti-parallel
Strand 4	E	664	667	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	702	704	first strand
Strand 2	C	788	790	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	715	first strand
Strand 2	E	1072	1076	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	718	727	first strand
Strand 2	E	1059	1069	anti-parallel
Strand 3	E	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	733	735	first strand
Strand 2	E	859	861	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1081	1082	first strand
Strand 2	E	1087	1090	anti-parallel
Strand 3	E	1120	1121	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1094	1097	first strand
Strand 2	E	1102	1105	anti-parallel
Strand 3	E	1113	1114	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	190	194	anti-parallel
Strand 6	C	205	207	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	169	first strand
Strand 2	C	129	131	anti-parallel
Strand 3	C	116	119	anti-parallel
Strand 4	C	101	106	anti-parallel
Strand 5	C	238	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	202	first strand
Strand 2	C	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	650	651	anti-parallel
Strand 5	C	642	643	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	326	first strand
Strand 2	C	539	543	parallel
Strand 3	C	546	547	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	403	anti-parallel
Strand 3	C	507	515	anti-parallel
Strand 4	C	431	437	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	659	660	first strand
Strand 2	C	695	697	parallel
Strand 3	C	670	672	anti-parallel
Strand 4	C	664	665	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	674	675	first strand
Strand 2	C	691	692	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	715	first strand
Strand 2	C	1072	1076	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1081	1082	first strand
Strand 2	C	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1089	1090	first strand
Strand 2	C	1120	1121	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel
Strand 3	C	1113	1114	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YR2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YR2