Analysis of interatomic Contacts of Structural Units in PDB entry:
7YSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YSZ entry

There are 2 chains in PDB entry 7YSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 10GLY 312
B
 VAL 10PHE 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7YSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
45 51Right-handed alpha
Helix 3
AA3
A
73 84Right-handed alpha
Helix 4
AA4
A
84 93Right-handed alpha
Helix 5
AA5
A
108 123Right-handed alpha
Helix 6
AA6
A
135 138Right-handed 310
Helix 7
AA7
A
139 157Right-handed alpha
Helix 8
AA8
A
165 171Right-handed alpha
Helix 9
AA9
A
186 201Right-handed alpha
Helix 10
AB1
A
208 217Right-handed alpha
Helix 11
AB2
A
233 244Right-handed alpha
Helix 12
AB3
A
269 285Right-handed alpha
Helix 13
AB4
B
19 32Right-handed alpha
Helix 14
AB5
B
45 52Right-handed alpha
Helix 15
AB6
B
76 84Right-handed alpha
Helix 16
AB7
B
84 93Right-handed alpha
Helix 17
AB8
B
108 123Right-handed alpha
Helix 18
AB9
B
135 138Right-handed 310
Helix 19
AC1
B
139 155Right-handed alpha
Helix 20
AC2
B
165 174Right-handed alpha
Helix 21
AC3
B
176 180Right-handed 310
Helix 22
AC4
B
181 201Right-handed alpha
Helix 23
AC5
B
208 217Right-handed alpha
Helix 24
AC6
B
233 244Right-handed alpha
Helix 25
AC7
B
269 285Right-handed alpha
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There are 3 sheets in PDB entry 7YSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
37 43parallel
Strand 3
A
13 18parallel
Strand 4
A
97 103parallel
Strand 5
A
126 133parallel
Strand 6
A
159 164parallel
Strand 7
B
220 221parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 296first strand
Strand 2
A
257 264parallel
Strand 3
A
304 311anti-parallel
Strand 4
A
220 229anti-parallel
Strand 5
B
159 164parallel
Strand 6
B
126 133parallel
Strand 7
B
97 103parallel
Strand 8
B
13 18parallel
Strand 9
B
38 43parallel
Strand 10
B
56 59parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 230first strand
Strand 2
B
303 311anti-parallel
Strand 3
B
257 264anti-parallel
Strand 4
B
289 296parallel
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