Analysis of interatomic Contacts of Structural Units in PDB entry:
7YTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YTF entry

There is 1 chain in PDB entry 7YTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 3THR 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7YTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
19 30Right-handed alpha
Helix 3
AA3
A
32 48Right-handed alpha
Helix 4
AA4
A
57 63Right-handed alpha
Helix 5
AA5
A
64 73Right-handed alpha
Helix 6
AA6
A
75 89Right-handed alpha
Helix 7
AA7
A
92 99Right-handed alpha
Helix 8
AA8
A
102 119Right-handed alpha
Helix 9
AA9
A
132 144Right-handed alpha
Helix 10
AB1
A
146 160Right-handed alpha
Helix 11
AB2
A
196 209Right-handed alpha
Helix 12
AB3
A
210 216Right-handed alpha
Helix 13
AB4
A
234 246Right-handed alpha
Helix 14
AB5
A
262 264Right-handed 310
Helix 15
AB6
A
279 283Right-handed 310
Helix 16
AB7
A
309 315Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7YTF.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
299 306parallel
Strand 4
A
285 293anti-parallel
Strand 5
A
266 275anti-parallel
Strand 6
A
250 260anti-parallel
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