Analysis of interatomic Contacts of Structural Units in PDB entry:
7YUX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YUX entry

There are 6 chains in PDB entry 7YUX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 2	PRO 774
C	ARG 2	PRO 774
E	ARG 2	PRO 774
D	ARG 2	PRO 774
F	ARG 2	PRO 774
B	ARG 2	PRO 774

There are180 helices in PDB entry 7YUX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	38	Right-handed alpha
Helix 2	AA2	A	58	62	Right-handed 310
Helix 3	AA3	A	117	139	Right-handed alpha
Helix 4	AA4	A	149	153	Right-handed 310
Helix 5	AA5	A	157	170	Right-handed alpha
Helix 6	AA6	A	172	182	Right-handed alpha
Helix 7	AA7	A	186	237	Right-handed alpha
Helix 8	AA8	A	238	244	Right-handed alpha
Helix 9	AA9	A	244	256	Right-handed alpha
Helix 10	AB1	A	259	273	Right-handed alpha
Helix 11	AB2	A	282	296	Right-handed alpha
Helix 12	AB3	A	307	315	Right-handed alpha
Helix 13	AB4	A	324	337	Right-handed alpha
Helix 14	AB5	A	360	373	Right-handed alpha
Helix 15	AB6	A	386	391	Right-handed alpha
Helix 16	AB7	A	403	412	Right-handed alpha
Helix 17	AB8	A	423	427	Right-handed 310
Helix 18	AB9	A	434	444	Right-handed alpha
Helix 19	AC1	A	444	449	Right-handed alpha
Helix 20	AC2	A	478	482	Right-handed 310
Helix 21	AC3	A	494	505	Right-handed alpha
Helix 22	AC4	A	505	514	Right-handed alpha
Helix 23	AC5	A	523	534	Right-handed alpha
Helix 24	AC6	A	540	561	Right-handed alpha
Helix 25	AC7	A	573	578	Right-handed alpha
Helix 26	AC8	A	630	647	Right-handed alpha
Helix 27	AC9	A	679	691	Right-handed alpha
Helix 28	AD1	A	717	728	Right-handed alpha
Helix 29	AD2	A	739	744	Right-handed alpha
Helix 30	AD3	A	747	754	Right-handed alpha
Helix 31	AD4	A	761	769	Right-handed alpha
Helix 32	AD5	C	30	39	Right-handed alpha
Helix 33	AD6	C	117	138	Right-handed alpha
Helix 34	AD7	C	145	149	Right-handed 310
Helix 35	AD8	C	157	168	Right-handed alpha
Helix 36	AD9	C	172	182	Right-handed alpha
Helix 37	AE1	C	184	234	Right-handed alpha
Helix 38	AE2	C	235	237	Right-handed 310
Helix 39	AE3	C	245	250	Right-handed alpha
Helix 40	AE4	C	251	253	Right-handed 310
Helix 41	AE5	C	259	273	Right-handed alpha
Helix 42	AE6	C	283	296	Right-handed alpha
Helix 43	AE7	C	308	318	Right-handed alpha
Helix 44	AE8	C	324	338	Right-handed alpha
Helix 45	AE9	C	360	373	Right-handed alpha
Helix 46	AF1	C	403	412	Right-handed alpha
Helix 47	AF2	C	423	427	Right-handed 310
Helix 48	AF3	C	434	442	Right-handed alpha
Helix 49	AF4	C	447	451	Right-handed 310
Helix 50	AF5	C	479	483	Right-handed 310
Helix 51	AF6	C	494	505	Right-handed alpha
Helix 52	AF7	C	506	515	Right-handed alpha
Helix 53	AF8	C	523	535	Right-handed alpha
Helix 54	AF9	C	540	560	Right-handed alpha
Helix 55	AG1	C	570	572	Right-handed 310
Helix 56	AG2	C	573	578	Right-handed alpha
Helix 57	AG3	C	630	646	Right-handed alpha
Helix 58	AG4	C	679	693	Right-handed alpha
Helix 59	AG5	C	717	728	Right-handed alpha
Helix 60	AG6	C	738	740	Right-handed 310
Helix 61	AG7	C	741	746	Right-handed 310
Helix 62	AG8	C	747	753	Right-handed alpha
Helix 63	AG9	C	761	770	Right-handed alpha
Helix 64	AH1	E	28	39	Right-handed alpha
Helix 65	AH2	E	117	139	Right-handed alpha
Helix 66	AH3	E	140	143	Right-handed 310
Helix 67	AH4	E	146	150	Right-handed 310
Helix 68	AH5	E	157	169	Right-handed alpha
Helix 69	AH6	E	172	182	Right-handed alpha
Helix 70	AH7	E	185	234	Right-handed alpha
Helix 71	AH8	E	239	256	Right-handed alpha
Helix 72	AH9	E	259	272	Right-handed alpha
Helix 73	AI1	E	280	294	Right-handed alpha
Helix 74	AI2	E	308	319	Right-handed alpha
Helix 75	AI3	E	326	337	Right-handed alpha
Helix 76	AI4	E	360	372	Right-handed alpha
Helix 77	AI5	E	403	412	Right-handed alpha
Helix 78	AI6	E	435	444	Right-handed alpha
Helix 79	AI7	E	478	483	Right-handed alpha
Helix 80	AI8	E	494	505	Right-handed alpha
Helix 81	AI9	E	505	513	Right-handed alpha
Helix 82	AJ1	E	523	535	Right-handed alpha
Helix 83	AJ2	E	540	560	Right-handed alpha
Helix 84	AJ3	E	573	579	Right-handed alpha
Helix 85	AJ4	E	630	646	Right-handed alpha
Helix 86	AJ5	E	648	652	Right-handed 310
Helix 87	AJ6	E	679	693	Right-handed alpha
Helix 88	AJ7	E	717	728	Right-handed alpha
Helix 89	AJ8	E	738	740	Right-handed 310
Helix 90	AJ9	E	761	767	Right-handed alpha
Helix 91	AK1	D	27	40	Right-handed alpha
Helix 92	AK2	D	117	139	Right-handed alpha
Helix 93	AK3	D	157	169	Right-handed alpha
Helix 94	AK4	D	172	182	Right-handed alpha
Helix 95	AK5	D	184	234	Right-handed alpha
Helix 96	AK6	D	243	255	Right-handed alpha
Helix 97	AK7	D	259	270	Right-handed alpha
Helix 98	AK8	D	271	273	Right-handed 310
Helix 99	AK9	D	281	296	Right-handed alpha
Helix 100	AL1	D	307	319	Right-handed alpha
Helix 101	AL2	D	325	339	Right-handed alpha
Helix 102	AL3	D	360	373	Right-handed alpha
Helix 103	AL4	D	386	391	Right-handed alpha
Helix 104	AL5	D	403	412	Right-handed alpha
Helix 105	AL6	D	434	443	Right-handed alpha
Helix 106	AL7	D	446	450	Right-handed 310
Helix 107	AL8	D	473	477	Right-handed 310
Helix 108	AL9	D	494	506	Right-handed alpha
Helix 109	AM1	D	506	515	Right-handed alpha
Helix 110	AM2	D	523	535	Right-handed alpha
Helix 111	AM3	D	540	560	Right-handed alpha
Helix 112	AM4	D	573	578	Right-handed alpha
Helix 113	AM5	D	586	590	Right-handed 310
Helix 114	AM6	D	630	646	Right-handed alpha
Helix 115	AM7	D	679	693	Right-handed alpha
Helix 116	AM8	D	717	728	Right-handed alpha
Helix 117	AM9	D	738	740	Right-handed 310
Helix 118	AN1	D	742	746	Right-handed 310
Helix 119	AN2	D	747	754	Right-handed alpha
Helix 120	AN3	D	761	769	Right-handed alpha
Helix 121	AN4	F	27	38	Right-handed alpha
Helix 122	AN5	F	117	139	Right-handed alpha
Helix 123	AN6	F	145	151	Right-handed alpha
Helix 124	AN7	F	157	169	Right-handed alpha
Helix 125	AN8	F	173	182	Right-handed alpha
Helix 126	AN9	F	184	235	Right-handed alpha
Helix 127	AO1	F	244	256	Right-handed alpha
Helix 128	AO2	F	259	272	Right-handed alpha
Helix 129	AO3	F	280	295	Right-handed alpha
Helix 130	AO4	F	308	317	Right-handed alpha
Helix 131	AO5	F	324	338	Right-handed alpha
Helix 132	AO6	F	361	372	Right-handed alpha
Helix 133	AO7	F	403	412	Right-handed alpha
Helix 134	AO8	F	434	444	Right-handed alpha
Helix 135	AO9	F	479	483	Right-handed 310
Helix 136	AP1	F	494	505	Right-handed alpha
Helix 137	AP2	F	505	515	Right-handed alpha
Helix 138	AP3	F	523	535	Right-handed alpha
Helix 139	AP4	F	541	560	Right-handed alpha
Helix 140	AP5	F	573	578	Right-handed alpha
Helix 141	AP6	F	631	647	Right-handed alpha
Helix 142	AP7	F	648	651	Right-handed 310
Helix 143	AP8	F	679	693	Right-handed alpha
Helix 144	AP9	F	717	728	Right-handed alpha
Helix 145	AQ1	F	738	745	Right-handed 310
Helix 146	AQ2	F	747	752	Right-handed alpha
Helix 147	AQ3	F	761	767	Right-handed alpha
Helix 148	AQ4	B	30	39	Right-handed alpha
Helix 149	AQ5	B	58	62	Right-handed 310
Helix 150	AQ6	B	118	137	Right-handed alpha
Helix 151	AQ7	B	138	143	Right-handed 310
Helix 152	AQ8	B	146	151	Right-handed alpha
Helix 153	AQ9	B	157	168	Right-handed alpha
Helix 154	AR1	B	172	182	Right-handed alpha
Helix 155	AR2	B	185	234	Right-handed alpha
Helix 156	AR3	B	237	241	Right-handed 310
Helix 157	AR4	B	246	256	Right-handed alpha
Helix 158	AR5	B	259	272	Right-handed alpha
Helix 159	AR6	B	280	296	Right-handed alpha
Helix 160	AR7	B	308	318	Right-handed alpha
Helix 161	AR8	B	319	324	Right-handed 310
Helix 162	AR9	B	325	339	Right-handed alpha
Helix 163	AS1	B	340	343	Right-handed 310
Helix 164	AS2	B	360	373	Right-handed alpha
Helix 165	AS3	B	387	392	Right-handed alpha
Helix 166	AS4	B	403	412	Right-handed alpha
Helix 167	AS5	B	434	444	Right-handed alpha
Helix 168	AS6	B	444	449	Right-handed alpha
Helix 169	AS7	B	473	477	Right-handed 310
Helix 170	AS8	B	478	482	Right-handed 310
Helix 171	AS9	B	494	505	Right-handed alpha
Helix 172	AT1	B	506	514	Right-handed alpha
Helix 173	AT2	B	524	535	Right-handed alpha
Helix 174	AT3	B	540	560	Right-handed alpha
Helix 175	AT4	B	573	578	Right-handed alpha
Helix 176	AT5	B	630	646	Right-handed alpha
Helix 177	AT6	B	679	693	Right-handed alpha
Helix 178	AT7	B	717	728	Right-handed alpha
Helix 179	AT8	B	739	745	Right-handed alpha
Helix 180	AT9	B	761	770	Right-handed alpha

There are 42 sheets in PDB entry 7YUX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	10	first strand
Strand 2	A	43	48	parallel
Strand 3	A	65	74	anti-parallel
Strand 4	A	82	94	anti-parallel
Strand 5	A	20	25	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	10	first strand
Strand 2	A	43	48	parallel
Strand 3	A	65	74	anti-parallel
Strand 4	A	82	94	anti-parallel
Strand 5	A	107	108	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	353	first strand
Strand 2	A	466	470	parallel
Strand 3	A	418	422	parallel
Strand 4	A	376	380	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	522	first strand
Strand 2	A	567	569	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	597	603	first strand
Strand 2	A	606	618	anti-parallel
Strand 3	A	661	666	anti-parallel
Strand 4	A	623	625	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	706	first strand
Strand 2	A	712	713	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	736	first strand
Strand 2	A	755	759	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	25	first strand
Strand 2	C	81	93	anti-parallel
Strand 3	C	65	77	anti-parallel
Strand 4	C	44	47	anti-parallel
Strand 5	C	5	9	parallel
Strand 6	C	104	105	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	379	380	first strand
Strand 2	C	420	422	parallel
Strand 3	C	468	471	parallel
Strand 4	C	352	354	parallel
Strand 5	C	487	489	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	520	522	first strand
Strand 2	C	567	569	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	596	603	first strand
Strand 2	C	606	613	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	617	618	first strand
Strand 2	C	661	662	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	732	736	first strand
Strand 2	C	755	759	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	23	first strand
Strand 2	E	84	93	anti-parallel
Strand 3	E	65	73	anti-parallel
Strand 4	E	43	46	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	353	354	first strand
Strand 2	E	488	489	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	380	first strand
Strand 2	E	418	422	parallel
Strand 3	E	466	469	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	520	522	first strand
Strand 2	E	567	569	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	596	597	first strand
Strand 2	E	612	618	anti-parallel
Strand 3	E	661	666	anti-parallel
Strand 4	E	623	626	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	600	601	first strand
Strand 2	E	608	609	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	732	736	first strand
Strand 2	E	755	759	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	104	106	anti-parallel
Strand 3	D	97	98	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	25	first strand
Strand 2	D	82	87	anti-parallel
Strand 3	D	66	73	anti-parallel
Strand 4	D	43	46	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	25	first strand
Strand 2	D	82	87	anti-parallel
Strand 3	D	66	73	anti-parallel
Strand 4	D	91	92	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	380	first strand
Strand 2	D	418	422	parallel
Strand 3	D	466	471	parallel
Strand 4	D	352	354	parallel
Strand 5	D	487	489	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	520	522	first strand
Strand 2	D	567	569	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	596	603	first strand
Strand 2	D	606	618	anti-parallel
Strand 3	D	661	666	anti-parallel
Strand 4	D	623	626	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	705	707	first strand
Strand 2	D	711	713	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	732	736	first strand
Strand 2	D	755	759	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	104	105	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	23	first strand
Strand 2	F	84	90	anti-parallel
Strand 3	F	62	74	anti-parallel
Strand 4	F	43	49	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	379	380	first strand
Strand 2	F	418	422	parallel
Strand 3	F	466	471	parallel
Strand 4	F	352	354	parallel
Strand 5	F	487	488	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	520	522	first strand
Strand 2	F	567	569	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	596	601	first strand
Strand 2	F	608	615	anti-parallel
Strand 3	F	663	666	anti-parallel
Strand 4	F	623	626	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	735	736	first strand
Strand 2	F	758	759	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	48	first strand
Strand 2	B	5	10	parallel
Strand 3	B	104	105	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	B	85	87	anti-parallel
Strand 3	B	70	71	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	91	93	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	418	422	parallel
Strand 3	B	466	471	parallel
Strand 4	B	352	354	parallel
Strand 5	B	488	489	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	597	601	first strand
Strand 2	B	608	612	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	614	615	first strand
Strand 2	B	663	665	anti-parallel
Strand 3	B	623	625	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	732	736	first strand
Strand 2	B	755	759	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YUX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YUX