Analysis of interatomic Contacts of Structural Units in PDB entry:
7YUY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7YUY entry

There is 1 chain in PDB entry 7YUY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	GLU 146	SER 1860

There are 72 helices in PDB entry 7YUY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	160	176	Right-handed alpha
Helix 2	AA2	F	178	196	Right-handed alpha
Helix 3	AA3	F	201	214	Right-handed alpha
Helix 4	AA4	F	219	229	Right-handed alpha
Helix 5	AA5	F	233	243	Right-handed alpha
Helix 6	AA6	F	282	293	Right-handed alpha
Helix 7	AA7	F	294	296	Right-handed 310
Helix 8	AA8	F	297	313	Right-handed alpha
Helix 9	AA9	F	321	337	Right-handed alpha
Helix 10	AB1	F	339	344	Right-handed alpha
Helix 11	AB2	F	351	357	Right-handed alpha
Helix 12	AB3	F	358	368	Right-handed alpha
Helix 13	AB4	F	389	394	Right-handed alpha
Helix 14	AB5	F	395	398	Right-handed 310
Helix 15	AB6	F	399	404	Right-handed alpha
Helix 16	AB7	F	419	428	Right-handed 310
Helix 17	AB8	F	444	452	Right-handed alpha
Helix 18	AB9	F	459	470	Right-handed alpha
Helix 19	AC1	F	489	497	Right-handed alpha
Helix 20	AC2	F	498	515	Right-handed alpha
Helix 21	AC3	F	525	551	Right-handed alpha
Helix 22	AC4	F	559	581	Right-handed alpha
Helix 23	AC5	F	584	588	Right-handed 310
Helix 24	AC6	F	616	636	Right-handed alpha
Helix 25	AC7	F	641	644	Right-handed 310
Helix 26	AC8	F	645	652	Right-handed alpha
Helix 27	AC9	F	671	683	Right-handed alpha
Helix 28	AD1	F	686	711	Right-handed alpha
Helix 29	AD2	F	718	723	Right-handed alpha
Helix 30	AD3	F	726	734	Right-handed alpha
Helix 31	AD4	F	747	764	Right-handed alpha
Helix 32	AD5	F	768	773	Right-handed alpha
Helix 33	AD6	F	793	797	Right-handed 310
Helix 34	AD7	F	813	825	Right-handed alpha
Helix 35	AD8	F	857	862	Right-handed alpha
Helix 36	AD9	F	871	880	Right-handed alpha
Helix 37	AE1	F	882	896	Right-handed alpha
Helix 38	AE2	F	933	946	Right-handed alpha
Helix 39	AE3	F	950	958	Right-handed alpha
Helix 40	AE4	F	958	972	Right-handed alpha
Helix 41	AE5	F	973	979	Right-handed alpha
Helix 42	AE6	F	982	995	Right-handed alpha
Helix 43	AE7	F	1006	1010	Right-handed 310
Helix 44	AE8	F	1011	1025	Right-handed alpha
Helix 45	AE9	F	1082	1089	Right-handed alpha
Helix 46	AF1	F	1109	1113	Right-handed 310
Helix 47	AF2	F	1114	1119	Right-handed alpha
Helix 48	AF3	F	1169	1187	Right-handed alpha
Helix 49	AF4	F	1201	1206	Right-handed alpha
Helix 50	AF5	F	1223	1229	Right-handed alpha
Helix 51	AF6	F	1273	1280	Right-handed alpha
Helix 52	AF7	F	1283	1292	Right-handed alpha
Helix 53	AF8	F	1294	1320	Right-handed alpha
Helix 54	AF9	F	1348	1353	Right-handed alpha
Helix 55	AG1	F	1353	1365	Right-handed alpha
Helix 56	AG2	F	1371	1379	Right-handed alpha
Helix 57	AG3	F	1382	1393	Right-handed alpha
Helix 58	AG4	F	1398	1406	Right-handed alpha
Helix 59	AG5	F	1407	1418	Right-handed alpha
Helix 60	AG6	F	1437	1446	Right-handed alpha
Helix 61	AG7	F	1450	1467	Right-handed alpha
Helix 62	AG8	F	1469	1471	Right-handed 310
Helix 63	AG9	F	1472	1481	Right-handed alpha
Helix 64	AH1	F	1497	1512	Right-handed alpha
Helix 65	AH2	F	1565	1584	Right-handed alpha
Helix 66	AH3	F	1598	1626	Right-handed alpha
Helix 67	AH4	F	1639	1665	Right-handed alpha
Helix 68	AH5	F	1669	1697	Right-handed alpha
Helix 69	AH6	F	1725	1751	Right-handed alpha
Helix 70	AH7	F	1754	1758	Right-handed 310
Helix 71	AH8	F	1763	1775	Right-handed alpha
Helix 72	AH9	F	1786	1821	Right-handed alpha

There are 4 sheets in PDB entry 7YUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	371	372	first strand
Strand 2	F	377	378	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	779	781	first strand
Strand 2	F	788	790	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	999	1004	first strand
Strand 2	F	842	848	parallel
Strand 3	F	1097	1100	parallel
Strand 4	F	1198	1200	anti-parallel
Strand 5	F	1148	1154	anti-parallel
Strand 6	F	1235	1243	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1030	1032	first strand
Strand 2	F	1048	1052	anti-parallel
Strand 3	F	1068	1071	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7YUY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7YUY