Analysis of interatomic Contacts of Structural Units in PDB entry:
7YW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YW4 entry

There is 1 chain in PDB entry 7YW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 101ILE 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7YW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
107 111Right-handed 310
Helix 2
AA2
A
120 131Right-handed alpha
Helix 3
AA3
A
173 178Right-handed alpha
Helix 4
AA4
A
206 208Right-handed 310
Helix 5
AA5
A
209 223Right-handed alpha
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There are 2 sheets in PDB entry 7YW4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
180 183anti-parallel
Strand 3
A
188 190anti-parallel
Strand 4
A
141 146anti-parallel
Strand 5
A
114 119anti-parallel
Strand 6
A
163 167anti-parallel
Strand 7
A
198 203anti-parallel
Strand 8
A
227 229parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
193 194anti-parallel
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