Analysis of interatomic Contacts of Structural Units in PDB entry:
7YX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YX5 entry

There is 1 chain in PDB entry 7YX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 56THR 700
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7YX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 80Right-handed alpha
Helix 2
AA2
A
97 102Right-handed alpha
Helix 3
AA3
A
103 108Right-handed 310
Helix 4
AA4
A
112 116Right-handed 310
Helix 5
AA5
A
151 157Right-handed 310
Helix 6
AA6
A
165 173Right-handed alpha
Helix 7
AA7
A
178 194Right-handed alpha
Helix 8
AA8
A
202 221Right-handed alpha
Helix 9
AA9
A
283 289Right-handed alpha
Helix 10
AB1
A
301 305Right-handed 310
Helix 11
AB2
A
350 363Right-handed alpha
Helix 12
AB3
A
366 374Right-handed alpha
Helix 13
AB4
A
405 410Right-handed alpha
Helix 14
AB5
A
460 468Right-handed alpha
Helix 15
AB6
A
520 523Right-handed 310
Helix 16
AB7
A
524 559Right-handed alpha
Helix 17
AB8
A
571 586Right-handed alpha
Helix 18
AB9
A
587 593Right-handed 310
Helix 19
AC1
A
594 599Right-handed alpha
Helix 20
AC2
A
602 616Right-handed alpha
Helix 21
AC3
A
616 622Right-handed alpha
Helix 22
AC4
A
655 659Right-handed 310
Helix 23
AC5
A
668 684Right-handed alpha
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There are 7 sheets in PDB entry 7YX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 310first strand
Strand 2
A
85 88parallel
Strand 3
A
61 64parallel
Strand 4
A
346 348parallel
Strand 5
A
651 653parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
146 147anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 273first strand
Strand 2
A
279 281anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 321first strand
Strand 2
A
324 331anti-parallel
Strand 3
A
337 341anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
623 625anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 455first strand
Strand 2
A
476 483anti-parallel
Strand 3
A
398 402anti-parallel
Strand 4
A
564 566anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 493first strand
Strand 2
A
505 507anti-parallel
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