Analysis of interatomic Contacts of Structural Units in PDB entry:
7YXO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YXO entry

There are 6 chains in PDB entry 7YXO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 530HIS 775
B
 ARG 17SER 26
C
 PRO 530HIS 775
D
 PRO 18SER 26
E
 PRO 530LEU 773
F
 PRO 18SER 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7YXO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
531 540Right-handed alpha
Helix 2
AA2
A
556 580Right-handed alpha
Helix 3
AA3
A
588 617Right-handed alpha
Helix 4
AA4
A
639 657Right-handed alpha
Helix 5
AA5
A
659 672Right-handed alpha
Helix 6
AA6
A
682 703Right-handed alpha
Helix 7
AA7
A
713 742Right-handed alpha
Helix 8
AA8
A
743 746Right-handed 310
Helix 9
AA9
A
750 767Right-handed alpha
Helix 10
AB1
B
18 26Right-handed alpha
Helix 11
AB2
C
531 540Right-handed alpha
Helix 12
AB3
C
557 580Right-handed alpha
Helix 13
AB4
C
588 617Right-handed alpha
Helix 14
AB5
C
639 657Right-handed alpha
Helix 15
AB6
C
659 672Right-handed alpha
Helix 16
AB7
C
682 703Right-handed alpha
Helix 17
AB8
C
711 742Right-handed alpha
Helix 18
AB9
C
743 746Right-handed 310
Helix 19
AC1
C
750 767Right-handed alpha
Helix 20
AC2
D
19 26Right-handed alpha
Helix 21
AC3
E
531 540Right-handed alpha
Helix 22
AC4
E
556 580Right-handed alpha
Helix 23
AC5
E
588 617Right-handed alpha
Helix 24
AC6
E
631 635Right-handed 310
Helix 25
AC7
E
639 657Right-handed alpha
Helix 26
AC8
E
659 672Right-handed alpha
Helix 27
AC9
E
684 703Right-handed alpha
Helix 28
AD1
E
715 720Right-handed alpha
Helix 29
AD2
E
720 725Right-handed alpha
Helix 30
AD3
E
727 742Right-handed alpha
Helix 31
AD4
E
743 746Right-handed 310
Helix 32
AD5
E
750 767Right-handed alpha
Helix 33
AD6
F
19 25Right-handed alpha
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There are 5 sheets in PDB entry 7YXO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
628 629anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
674 676first strand
Strand 2
A
769 771anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
621 624first strand
Strand 2
C
627 629anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
674 676first strand
Strand 2
C
769 771anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
621 622first strand
Strand 2
E
628 629anti-parallel
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