Analysis of interatomic Contacts of Structural Units in PDB entry:
7YXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YXR entry

There are 4 chains in PDB entry 7YXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 528HIS 775
C
 GLU 528GLN 776
R
 ARG 17SER 28
S
 ARG 17SER 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7YXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
531 539Right-handed alpha
Helix 2
AA2
A
555 580Right-handed alpha
Helix 3
AA3
A
583 587Right-handed 310
Helix 4
AA4
A
588 617Right-handed alpha
Helix 5
AA5
A
630 635Right-handed alpha
Helix 6
AA6
A
638 657Right-handed alpha
Helix 7
AA7
A
659 672Right-handed alpha
Helix 8
AA8
A
682 703Right-handed alpha
Helix 9
AA9
A
710 742Right-handed alpha
Helix 10
AB1
A
750 766Right-handed alpha
Helix 11
AB2
C
531 539Right-handed alpha
Helix 12
AB3
C
555 580Right-handed alpha
Helix 13
AB4
C
583 587Right-handed 310
Helix 14
AB5
C
588 617Right-handed alpha
Helix 15
AB6
C
638 657Right-handed alpha
Helix 16
AB7
C
659 672Right-handed alpha
Helix 17
AB8
C
682 703Right-handed alpha
Helix 18
AB9
C
710 742Right-handed alpha
Helix 19
AC1
C
750 766Right-handed alpha
Helix 20
AC2
R
18 27Right-handed alpha
Helix 21
AC3
S
18 27Right-handed alpha
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There are 4 sheets in PDB entry 7YXR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 624first strand
Strand 2
A
627 628anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
674 676first strand
Strand 2
A
769 771anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
621 624first strand
Strand 2
C
627 629anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
674 676first strand
Strand 2
C
769 771anti-parallel
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