Analysis of interatomic Contacts of Structural Units in PDB entry:
7YXW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YXW entry

There are 2 chains in PDB entry 7YXW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 PRO 1ALA 11
A
 ILE 156SER 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7YXW

There are 2 sheets in PDB entry 7YXW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
193 197anti-parallel
Strand 3
A
182 188anti-parallel
Strand 4
A
159 163anti-parallel
Strand 5
A
210 212anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 276first strand
Strand 2
A
263 268anti-parallel
Strand 3
A
252 257anti-parallel
Strand 4
A
229 233anti-parallel
Strand 5
A
280 282anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il