Analysis of interatomic Contacts of Structural Units in PDB entry:
7YXY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YXY entry

There is 1 chain in PDB entry 7YXY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 321PRO 2475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 7YXY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
325 345Right-handed alpha
Helix 2
AA2
A
347 365Right-handed alpha
Helix 3
AA3
A
382 394Right-handed alpha
Helix 4
AA4
A
394 403Right-handed alpha
Helix 5
AA5
A
406 423Right-handed alpha
Helix 6
AA6
A
427 437Right-handed alpha
Helix 7
AA7
A
442 457Right-handed alpha
Helix 8
AA8
A
461 479Right-handed alpha
Helix 9
AA9
A
480 497Right-handed alpha
Helix 10
AB1
A
502 516Right-handed alpha
Helix 11
AB2
A
521 539Right-handed alpha
Helix 12
AB3
A
547 560Right-handed alpha
Helix 13
AB4
A
565 580Right-handed alpha
Helix 14
AB5
A
599 609Right-handed alpha
Helix 15
AB6
A
611 632Right-handed alpha
Helix 16
AB7
A
651 665Right-handed alpha
Helix 17
AB8
A
673 682Right-handed alpha
Helix 18
AB9
A
690 705Right-handed alpha
Helix 19
AC1
A
712 723Right-handed alpha
Helix 20
AC2
A
733 751Right-handed alpha
Helix 21
AC3
A
770 780Right-handed alpha
Helix 22
AC4
A
782 798Right-handed alpha
Helix 23
AC5
A
807 831Right-handed alpha
Helix 24
AC6
A
843 866Right-handed alpha
Helix 25
AC7
A
1014 1031Right-handed alpha
Helix 26
AC8
A
1033 1046Right-handed alpha
Helix 27
AC9
A
1050 1066Right-handed alpha
Helix 28
AD1
A
1077 1081Right-handed alpha
Helix 29
AD2
A
1084 1100Right-handed alpha
Helix 30
AD3
A
1112 1121Right-handed alpha
Helix 31
AD4
A
1121 1132Right-handed alpha
Helix 32
AD5
A
1142 1164Right-handed alpha
Helix 33
AD6
A
1235 1251Right-handed alpha
Helix 34
AD7
A
1252 1257Right-handed 310
Helix 35
AD8
A
1261 1269Right-handed alpha
Helix 36
AD9
A
1280 1299Right-handed alpha
Helix 37
AE1
A
1300 1307Right-handed alpha
Helix 38
AE2
A
1313 1321Right-handed alpha
Helix 39
AE3
A
1325 1342Right-handed alpha
Helix 40
AE4
A
1347 1359Right-handed alpha
Helix 41
AE5
A
1364 1369Right-handed alpha
Helix 42
AE6
A
1374 1389Right-handed alpha
Helix 43
AE7
A
1396 1417Right-handed alpha
Helix 44
AE8
A
1423 1438Right-handed alpha
Helix 45
AE9
A
1457 1466Right-handed alpha
Helix 46
AF1
A
1468 1479Right-handed alpha
Helix 47
AF2
A
1494 1510Right-handed alpha
Helix 48
AF3
A
1512 1528Right-handed alpha
Helix 49
AF4
A
1565 1577Right-handed alpha
Helix 50
AF5
A
1578 1587Right-handed alpha
Helix 51
AF6
A
1633 1657Right-handed alpha
Helix 52
AF7
A
1664 1671Right-handed alpha
Helix 53
AF8
A
1685 1704Right-handed alpha
Helix 54
AF9
A
1708 1714Right-handed alpha
Helix 55
AG1
A
1749 1760Right-handed alpha
Helix 56
AG2
A
1764 1768Right-handed 310
Helix 57
AG3
A
1825 1827Right-handed 310
Helix 58
AG4
A
1828 1837Right-handed alpha
Helix 59
AG5
A
1912 1920Right-handed alpha
Helix 60
AG6
A
1988 2005Right-handed alpha
Helix 61
AG7
A
2006 2019Right-handed alpha
Helix 62
AG8
A
2020 2024Right-handed 310
Helix 63
AG9
A
2034 2056Right-handed alpha
Helix 64
AH1
A
2060 2065Right-handed alpha
Helix 65
AH2
A
2067 2079Right-handed alpha
Helix 66
AH3
A
2081 2093Right-handed alpha
Helix 67
AH4
A
2098 2105Right-handed alpha
Helix 68
AH5
A
2109 2127Right-handed alpha
Helix 69
AH6
A
2151 2163Right-handed alpha
Helix 70
AH7
A
2167 2171Right-handed 310
Helix 71
AH8
A
2175 2188Right-handed alpha
Helix 72
AH9
A
2189 2199Right-handed alpha
Helix 73
AI1
A
2200 2208Right-handed alpha
Helix 74
AI2
A
2225 2238Right-handed alpha
Helix 75
AI3
A
2272 2280Right-handed alpha
Helix 76
AI4
A
2283 2292Right-handed alpha
Helix 77
AI5
A
2296 2308Right-handed alpha
Helix 78
AI6
A
2310 2327Right-handed alpha
Helix 79
AI7
A
2329 2332Right-handed 310
Helix 80
AI8
A
2333 2345Right-handed alpha
Helix 81
AI9
A
2350 2360Right-handed alpha
Helix 82
AJ1
A
2368 2377Right-handed alpha
Helix 83
AJ2
A
2380 2398Right-handed alpha
Helix 84
AJ3
A
2399 2404Right-handed alpha
Helix 85
AJ4
A
2408 2428Right-handed alpha
Helix 86
AJ5
A
2463 2471Right-handed alpha
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There are 9 sheets in PDB entry 7YXY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
754 755first strand
Strand 2
A
762 763anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1558 1559first strand
Strand 2
A
1661 1662parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1672 1673first strand
Strand 2
A
1676 1677anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1730 1737first strand
Strand 2
A
1716 1724anti-parallel
Strand 3
A
1780 1788anti-parallel
Strand 4
A
1761 1763anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1740 1743first strand
Strand 2
A
1792 1798parallel
Strand 3
A
1946 1955anti-parallel
Strand 4
A
1862 1872anti-parallel
Strand 5
A
1821 1823anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1740 1743first strand
Strand 2
A
1792 1798parallel
Strand 3
A
1946 1955anti-parallel
Strand 4
A
1862 1872anti-parallel
Strand 5
A
1879 1885anti-parallel
Strand 6
A
1897 1901anti-parallel
Strand 7
A
1904 1907anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1769 1771first strand
Strand 2
A
1776 1778anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1800 1803first strand
Strand 2
A
1808 1811anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1924 1931first strand
Strand 2
A
1936 1943anti-parallel
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