Analysis of interatomic Contacts of Structural Units in PDB entry:
7YZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YZ4 entry

There is 1 chain in PDB entry 7YZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 46GLN 1910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 7YZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 58Right-handed alpha
Helix 2
AA2
A
66 81Right-handed alpha
Helix 3
AA3
A
81 86Right-handed alpha
Helix 4
AA4
A
89 93Right-handed 310
Helix 5
AA5
A
107 117Right-handed alpha
Helix 6
AA6
A
126 132Right-handed alpha
Helix 7
AA7
A
134 144Right-handed alpha
Helix 8
AA8
A
152 162Right-handed alpha
Helix 9
AA9
A
176 182Right-handed 310
Helix 10
AB1
A
184 195Right-handed alpha
Helix 11
AB2
A
214 231Right-handed alpha
Helix 12
AB3
A
265 280Right-handed alpha
Helix 13
AB4
A
300 313Right-handed alpha
Helix 14
AB5
A
314 336Right-handed alpha
Helix 15
AB6
A
338 358Right-handed alpha
Helix 16
AB7
A
359 362Right-handed 310
Helix 17
AB8
A
374 387Right-handed alpha
Helix 18
AB9
A
450 468Right-handed alpha
Helix 19
AC1
A
498 510Right-handed alpha
Helix 20
AC2
A
521 524Right-handed 310
Helix 21
AC3
A
542 552Right-handed alpha
Helix 22
AC4
A
568 591Right-handed alpha
Helix 23
AC5
A
626 628Right-handed 310
Helix 24
AC6
A
629 641Right-handed alpha
Helix 25
AC7
A
686 705Right-handed alpha
Helix 26
AC8
A
782 786Right-handed 310
Helix 27
AC9
A
839 854Right-handed alpha
Helix 28
AD1
A
893 903Right-handed alpha
Helix 29
AD2
A
923 928Right-handed 310
Helix 30
AD3
A
967 976Right-handed alpha
Helix 31
AD4
A
1034 1036Right-handed 310
Helix 32
AD5
A
1044 1053Right-handed alpha
Helix 33
AD6
A
1053 1076Right-handed alpha
Helix 34
AD7
A
1293 1302Right-handed alpha
Helix 35
AD8
A
1303 1307Right-handed 310
Helix 36
AD9
A
1312 1335Right-handed alpha
Helix 37
AE1
A
1339 1351Right-handed alpha
Helix 38
AE2
A
1352 1363Right-handed alpha
Helix 39
AE3
A
1364 1369Right-handed 310
Helix 40
AE4
A
1552 1570Right-handed alpha
Helix 41
AE5
A
1571 1583Right-handed alpha
Helix 42
AE6
A
1650 1658Right-handed alpha
Helix 43
AE7
A
1662 1667Right-handed alpha
Helix 44
AE8
A
1674 1681Right-handed alpha
Helix 45
AE9
A
1695 1716Right-handed alpha
Helix 46
AF1
A
1722 1734Right-handed alpha
Helix 47
AF2
A
1735 1746Right-handed alpha
Helix 48
AF3
A
1747 1752Right-handed 310
Helix 49
AF4
A
1756 1773Right-handed alpha
Helix 50
AF5
A
1799 1816Right-handed alpha
Helix 51
AF6
A
1821 1842Right-handed alpha
Helix 52
AF7
A
1846 1855Right-handed alpha
Helix 53
AF8
A
1890 1910Right-handed alpha
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There are 12 sheets in PDB entry 7YZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
60 63parallel
Strand 3
A
233 234parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
147 151parallel
Strand 3
A
95 100parallel
Strand 4
A
169 174parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 257first strand
Strand 2
A
559 565parallel
Strand 3
A
533 534parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 448first strand
Strand 2
A
515 519parallel
Strand 3
A
476 478parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 667first strand
Strand 2
A
679 680anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 750first strand
Strand 2
A
1547 1551anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
777 780first strand
Strand 2
A
823 834anti-parallel
Strand 3
A
816 820anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
777 780first strand
Strand 2
A
823 834anti-parallel
Strand 3
A
769 774anti-parallel
Strand 4
A
800 806anti-parallel
Strand 5
A
877 882anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
865 867first strand
Strand 2
A
1385 1387anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
987 992first strand
Strand 2
A
945 951anti-parallel
Strand 3
A
931 934anti-parallel
Strand 4
A
1038 1040anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1859 1861first strand
Strand 2
A
1872 1878anti-parallel
Strand 3
A
1865 1866anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1859 1861first strand
Strand 2
A
1872 1878anti-parallel
Strand 3
A
1882 1888anti-parallel
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