Analysis of interatomic Contacts of Structural Units in PDB entry:
7YZN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7YZN entry

There is 1 chain in PDB entry 7YZN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3GLU 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7YZN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 29Right-handed alpha
Helix 2
AA2
A
31 36Right-handed alpha
Helix 3
AA3
A
37 40Right-handed 310
Helix 4
AA4
A
51 59Right-handed alpha
Helix 5
AA5
A
60 65Right-handed 310
Helix 6
AA6
A
82 84Right-handed 310
Helix 7
AA7
A
85 96Right-handed alpha
Helix 8
AA8
A
110 124Right-handed alpha
Helix 9
AA9
A
133 137Right-handed 310
Helix 10
AB1
A
147 152Right-handed alpha
Helix 11
AB2
A
153 155Right-handed 310
Helix 12
AB3
A
156 177Right-handed alpha
Helix 13
AB4
A
185 187Right-handed 310
Helix 14
AB5
A
206 226Right-handed alpha
Helix 15
AB6
A
316 320Right-handed 310
Helix 16
AB7
A
331 349Right-handed alpha
Helix 17
AB8
A
364 378Right-handed alpha
Helix 18
AB9
A
391 405Right-handed alpha
Helix 19
AC1
A
406 408Right-handed 310
Helix 20
AC2
A
419 430Right-handed alpha
Helix 21
AC3
A
438 455Right-handed alpha
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There are 4 sheets in PDB entry 7YZN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 50first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
9 13parallel
Strand 4
A
98 104parallel
Strand 5
A
127 132parallel
Strand 6
A
193 198parallel
Strand 7
A
180 183parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
265 268anti-parallel
Strand 3
A
325 328anti-parallel
Strand 4
A
235 244anti-parallel
Strand 5
A
248 257anti-parallel
Strand 6
A
308 313anti-parallel
Strand 7
A
281 284anti-parallel
Strand 8
A
299 301anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
303 305anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 387first strand
Strand 2
A
358 362parallel
Strand 3
A
410 414parallel
Strand 4
A
432 436parallel
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