Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z14

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z14 entry

There are 7 chains in PDB entry 7Z14 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	ILE 431
B	SER 1	ALA 469
C	ASN 2	CYS 500
D	SER 1	VAL 425
E	GLU 1	PRO 489
F	MET 1	ASN 60
G	MET 1	ASN 60

There are 48 helices in PDB entry 7Z14. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	12	Right-handed alpha
Helix 2	AA2	A	63	66	Right-handed 310
Helix 3	AA3	A	81	85	Right-handed 310
Helix 4	AA4	A	212	219	Right-handed alpha
Helix 5	AA5	A	219	230	Right-handed alpha
Helix 6	AA6	A	231	235	Right-handed 310
Helix 7	AA7	A	241	264	Right-handed alpha
Helix 8	AA8	A	272	300	Right-handed alpha
Helix 9	AA9	A	312	317	Right-handed alpha
Helix 10	AB1	A	320	324	Right-handed 310
Helix 11	AB2	A	398	426	Right-handed alpha
Helix 12	AB3	B	2	12	Right-handed alpha
Helix 13	AB4	B	68	72	Right-handed 310
Helix 14	AB5	B	81	85	Right-handed 310
Helix 15	AB6	B	217	241	Right-handed alpha
Helix 16	AB7	B	242	246	Right-handed 310
Helix 17	AB8	B	247	270	Right-handed alpha
Helix 18	AB9	B	278	307	Right-handed alpha
Helix 19	AC1	B	315	323	Right-handed alpha
Helix 20	AC2	B	425	460	Right-handed alpha
Helix 21	AC3	C	3	13	Right-handed alpha
Helix 22	AC4	C	83	87	Right-handed 310
Helix 23	AC5	C	226	232	Right-handed alpha
Helix 24	AC6	C	233	246	Right-handed alpha
Helix 25	AC7	C	247	249	Right-handed 310
Helix 26	AC8	C	255	276	Right-handed alpha
Helix 27	AC9	C	286	314	Right-handed alpha
Helix 28	AD1	C	443	476	Right-handed alpha
Helix 29	AD2	D	2	12	Right-handed alpha
Helix 30	AD3	D	68	73	Right-handed 310
Helix 31	AD4	D	81	85	Right-handed 310
Helix 32	AD5	D	212	218	Right-handed alpha
Helix 33	AD6	D	218	230	Right-handed alpha
Helix 34	AD7	D	231	235	Right-handed 310
Helix 35	AD8	D	241	264	Right-handed alpha
Helix 36	AD9	D	272	300	Right-handed alpha
Helix 37	AE1	D	400	425	Right-handed alpha
Helix 38	AE2	E	2	13	Right-handed alpha
Helix 39	AE3	E	62	66	Right-handed 310
Helix 40	AE4	E	68	72	Right-handed 310
Helix 41	AE5	E	81	85	Right-handed 310
Helix 42	AE6	E	131	135	Right-handed 310
Helix 43	AE7	E	219	226	Right-handed alpha
Helix 44	AE8	E	226	235	Right-handed alpha
Helix 45	AE9	E	236	242	Right-handed 310
Helix 46	AF1	E	251	271	Right-handed alpha
Helix 47	AF2	E	281	309	Right-handed alpha
Helix 48	AF3	E	440	473	Right-handed alpha

There are 27 sheets in PDB entry 7Z14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	109	111	anti-parallel
Strand 3	A	115	118	anti-parallel
Strand 4	A	57	61	anti-parallel
Strand 5	A	29	34	anti-parallel
Strand 6	A	156	160	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	44	first strand
Strand 2	A	49	55	anti-parallel
Strand 3	A	121	127	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	143	148	anti-parallel
Strand 3	A	198	209	anti-parallel
Strand 4	A	139	140	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	143	148	anti-parallel
Strand 3	A	198	209	anti-parallel
Strand 4	A	176	188	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	108	111	anti-parallel
Strand 3	B	115	118	anti-parallel
Strand 4	B	49	61	anti-parallel
Strand 5	B	121	127	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	108	111	anti-parallel
Strand 3	B	115	118	anti-parallel
Strand 4	B	49	61	anti-parallel
Strand 5	B	29	42	anti-parallel
Strand 6	B	156	160	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	145	148	anti-parallel
Strand 3	B	206	209	anti-parallel
Strand 4	B	193	196	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	140	first strand
Strand 2	B	212	215	anti-parallel
Strand 3	B	186	190	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	82	first strand
Strand 2	C	110	112	anti-parallel
Strand 3	C	117	120	anti-parallel
Strand 4	C	51	63	anti-parallel
Strand 5	C	123	129	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	82	first strand
Strand 2	C	110	112	anti-parallel
Strand 3	C	117	120	anti-parallel
Strand 4	C	51	63	anti-parallel
Strand 5	C	31	44	anti-parallel
Strand 6	C	158	162	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	94	first strand
Strand 2	C	146	149	anti-parallel
Strand 3	C	213	217	anti-parallel
Strand 4	C	197	201	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	220	223	anti-parallel
Strand 3	C	190	194	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	166	first strand
Strand 2	C	171	173	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	109	111	anti-parallel
Strand 3	D	115	118	anti-parallel
Strand 4	D	49	61	anti-parallel
Strand 5	D	121	127	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	109	111	anti-parallel
Strand 3	D	115	118	anti-parallel
Strand 4	D	49	61	anti-parallel
Strand 5	D	29	44	anti-parallel
Strand 6	D	156	160	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	143	148	anti-parallel
Strand 3	D	193	209	anti-parallel
Strand 4	D	139	140	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	143	148	anti-parallel
Strand 3	D	193	209	anti-parallel
Strand 4	D	176	190	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	59	first strand
Strand 2	E	29	34	anti-parallel
Strand 3	E	156	160	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	44	first strand
Strand 2	E	49	55	anti-parallel
Strand 3	E	121	127	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	80	first strand
Strand 2	E	108	110	anti-parallel
Strand 3	E	116	117	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	92	first strand
Strand 2	E	145	148	anti-parallel
Strand 3	E	207	211	anti-parallel
Strand 4	E	191	195	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	139	142	first strand
Strand 2	E	213	217	anti-parallel
Strand 3	E	184	188	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	162	163	first strand
Strand 2	E	166	167	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	4	first strand
Strand 2	F	14	16	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	39	first strand
Strand 2	F	22	28	anti-parallel
Strand 3	F	49	50	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	4	first strand
Strand 2	G	14	16	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	22	28	first strand
Strand 2	G	33	39	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z14

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z14