Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z2D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z2D entry

There are 5 chains in PDB entry 7Z2D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 0ALA 554
B
 PRO 4GLN 428
E
 A -2 C 1
E
 C 3 C 3
E
 C 5 G 33
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7Z2D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 44Right-handed alpha
Helix 2
AA2
A
79 83Right-handed 310
Helix 3
AA3
A
96 100Right-handed 310
Helix 4
AA4
A
112 117Right-handed 310
Helix 5
AA5
A
124 128Right-handed 310
Helix 6
AA6
A
155 175Right-handed alpha
Helix 7
AA7
A
194 212Right-handed alpha
Helix 8
AA8
A
220 224Right-handed 310
Helix 9
AA9
A
253 268Right-handed alpha
Helix 10
AB1
A
276 281Right-handed alpha
Helix 11
AB2
A
282 284Right-handed 310
Helix 12
AB3
A
296 311Right-handed alpha
Helix 13
AB4
A
363 383Right-handed alpha
Helix 14
AB5
A
394 403Right-handed alpha
Helix 15
AB6
A
473 488Right-handed alpha
Helix 16
AB7
A
499 508Right-handed alpha
Helix 17
AB8
A
515 528Right-handed alpha
Helix 18
AB9
A
544 554Right-handed alpha
Helix 19
AC1
B
27 43Right-handed alpha
Helix 20
AC2
B
79 84Right-handed alpha
Helix 21
AC3
B
84 91Right-handed alpha
Helix 22
AC4
B
112 116Right-handed 310
Helix 23
AC5
B
121 125Right-handed 310
Helix 24
AC6
B
134 138Right-handed 310
Helix 25
AC7
B
154 175Right-handed alpha
Helix 26
AC8
B
194 213Right-handed alpha
Helix 27
AC9
B
235 239Right-handed 310
Helix 28
AD1
B
253 268Right-handed alpha
Helix 29
AD2
B
277 283Right-handed 310
Helix 30
AD3
B
296 310Right-handed alpha
Helix 31
AD4
B
364 383Right-handed alpha
Helix 32
AD5
B
394 402Right-handed alpha
Helix 33
AD6
B
403 405Right-handed 310
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There are 8 sheets in PDB entry 7Z2D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 110first strand
Strand 2
A
186 191anti-parallel
Strand 3
A
179 181anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 354first strand
Strand 2
A
337 344anti-parallel
Strand 3
A
326 331anti-parallel
Strand 4
A
388 390parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
512 513anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 470first strand
Strand 2
A
452 458anti-parallel
Strand 3
A
439 446anti-parallel
Strand 4
A
492 497parallel
Strand 5
A
530 535parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
142 146anti-parallel
Strand 3
B
129 132anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 65first strand
Strand 2
B
68 75anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 183first strand
Strand 2
B
186 191anti-parallel
Strand 3
B
105 110anti-parallel
Strand 4
B
233 234anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 354first strand
Strand 2
B
336 344anti-parallel
Strand 3
B
326 333anti-parallel
Strand 4
B
388 390parallel
Strand 5
B
413 414parallel
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