Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z2R entry

There are 2 chains in PDB entry 7Z2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PRO 258
B
 GLY 1HIS 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 7Z2R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 45Right-handed alpha
Helix 2
AA2
A
68 76Right-handed alpha
Helix 3
AA3
A
89 94Right-handed alpha
Helix 4
AA4
A
119 126Right-handed alpha
Helix 5
AA5
A
137 148Right-handed alpha
Helix 6
AA6
A
155 165Right-handed alpha
Helix 7
AA7
A
166 170Right-handed 310
Helix 8
AA8
A
176 186Right-handed alpha
Helix 9
AA9
A
195 204Right-handed alpha
Helix 10
AB1
A
232 246Right-handed alpha
Helix 11
AB2
A
247 257Right-handed alpha
Helix 12
AB3
B
31 45Right-handed alpha
Helix 13
AB4
B
68 76Right-handed alpha
Helix 14
AB5
B
89 94Right-handed alpha
Helix 15
AB6
B
119 125Right-handed alpha
Helix 16
AB7
B
137 148Right-handed alpha
Helix 17
AB8
B
155 165Right-handed alpha
Helix 18
AB9
B
166 170Right-handed 310
Helix 19
AC1
B
176 186Right-handed alpha
Helix 20
AC2
B
195 204Right-handed alpha
Helix 21
AC3
B
232 246Right-handed alpha
Helix 22
AC4
B
247 257Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 7Z2R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
4 9parallel
Strand 3
A
81 82parallel
Strand 4
A
225 226anti-parallel
Strand 5
A
97 98anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
29 30anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
189 194parallel
Strand 3
A
103 112anti-parallel
Strand 4
A
210 222anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 52first strand
Strand 2
B
4 9parallel
Strand 3
B
81 83parallel
Strand 4
B
225 226anti-parallel
Strand 5
B
97 98anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
29 30anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
189 194parallel
Strand 3
B
103 112anti-parallel
Strand 4
B
210 212anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
189 194parallel
Strand 3
B
103 112anti-parallel
Strand 4
B
217 222anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il