Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z2V entry

There are 2 chains in PDB entry 7Z2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3ALA 259
B
 TYR -3GLU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 7Z2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 46Right-handed 310
Helix 2
AA2
A
47 59Right-handed alpha
Helix 3
AA3
A
77 81Right-handed 310
Helix 4
AA4
A
82 99Right-handed alpha
Helix 5
AA5
A
114 127Right-handed alpha
Helix 6
AA6
A
142 150Right-handed alpha
Helix 7
AA7
A
160 165Right-handed alpha
Helix 8
AA8
A
176 182Right-handed alpha
Helix 9
AA9
A
183 185Right-handed 310
Helix 10
AB1
A
187 192Right-handed alpha
Helix 11
AB2
A
210 220Right-handed alpha
Helix 12
AB3
A
237 257Right-handed alpha
Helix 13
AB4
B
44 46Right-handed 310
Helix 14
AB5
B
47 59Right-handed alpha
Helix 15
AB6
B
77 81Right-handed 310
Helix 16
AB7
B
82 99Right-handed alpha
Helix 17
AB8
B
114 127Right-handed alpha
Helix 18
AB9
B
128 131Right-handed 310
Helix 19
AC1
B
142 151Right-handed alpha
Helix 20
AC2
B
160 165Right-handed alpha
Helix 21
AC3
B
175 182Right-handed alpha
Helix 22
AC4
B
183 185Right-handed 310
Helix 23
AC5
B
187 192Right-handed alpha
Helix 24
AC6
B
210 220Right-handed alpha
Helix 25
AC7
B
237 257Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7Z2V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 9first strand
Strand 2
A
12 20anti-parallel
Strand 3
A
62 66anti-parallel
Strand 4
A
29 35parallel
Strand 5
A
103 113parallel
Strand 6
A
134 137parallel
Strand 7
A
198 203parallel
Strand 8
A
223 228parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
156 157anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
172 175anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 9first strand
Strand 2
B
12 20anti-parallel
Strand 3
B
62 66anti-parallel
Strand 4
B
29 35parallel
Strand 5
B
103 113parallel
Strand 6
B
134 137parallel
Strand 7
B
198 203parallel
Strand 8
B
223 228parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
156 157anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
172 174anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il