Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z47

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z47 entry

There are 9 chains in PDB entry 7Z47 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 3	SER 237
B	MET 3	SER 238
G	ALA 2	ARG 1005
D	ILE 2	MET 88
E	VAL 12	ILE 91
F	SER 24	ILE 91
I	GLU 4	ALA 97
H	GLU 4	ALA 97
C	GLU 4	ALA 97

There are 37 helices in PDB entry 7Z47. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	24	Right-handed alpha
Helix 2	AA2	A	28	33	Right-handed alpha
Helix 3	AA3	A	34	47	Right-handed alpha
Helix 4	AA4	A	93	98	Right-handed alpha
Helix 5	AA5	A	98	103	Right-handed alpha
Helix 6	AA6	A	170	176	Right-handed alpha
Helix 7	AA7	A	176	192	Right-handed alpha
Helix 8	AA8	A	194	218	Right-handed alpha
Helix 9	AA9	B	12	24	Right-handed alpha
Helix 10	AB1	B	28	33	Right-handed alpha
Helix 11	AB2	B	34	48	Right-handed alpha
Helix 12	AB3	B	52	54	Right-handed 310
Helix 13	AB4	B	93	103	Right-handed alpha
Helix 14	AB5	B	170	176	Right-handed alpha
Helix 15	AB6	B	176	192	Right-handed alpha
Helix 16	AB7	B	195	220	Right-handed alpha
Helix 17	AB8	G	19	23	Right-handed 310
Helix 18	AB9	G	55	59	Right-handed 310
Helix 19	AC1	G	244	246	Right-handed 310
Helix 20	AC2	G	758	767	Right-handed alpha
Helix 21	AC3	G	770	774	Right-handed 310
Helix 22	AC4	G	838	842	Right-handed 310
Helix 23	AC5	D	24	88	Right-handed alpha
Helix 24	AC6	E	30	91	Right-handed alpha
Helix 25	AC7	F	30	40	Right-handed alpha
Helix 26	AC8	F	42	91	Right-handed alpha
Helix 27	AC9	I	27	42	Right-handed alpha
Helix 28	AD1	I	87	97	Right-handed alpha
Helix 29	AD2	H	23	25	Right-handed 310
Helix 30	AD3	H	26	42	Right-handed alpha
Helix 31	AD4	H	54	62	Right-handed alpha
Helix 32	AD5	H	89	97	Right-handed alpha
Helix 33	AD6	C	23	25	Right-handed 310
Helix 34	AD7	C	26	42	Right-handed alpha
Helix 35	AD8	C	52	56	Right-handed 310
Helix 36	AD9	C	58	63	Right-handed alpha
Helix 37	AE1	C	86	97	Right-handed alpha

There are 26 sheets in PDB entry 7Z47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	60	first strand
Strand 2	A	152	157	anti-parallel
Strand 3	A	77	82	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	91	first strand
Strand 2	A	117	120	parallel
Strand 3	A	125	127	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	60	first strand
Strand 2	B	152	158	anti-parallel
Strand 3	B	74	82	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	117	118	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	32	first strand
Strand 2	G	904	911	anti-parallel
Strand 3	G	976	983	anti-parallel
Strand 4	G	937	945	anti-parallel
Strand 5	G	953	961	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	36	first strand
Strand 2	G	41	43	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	50	first strand
Strand 2	G	877	883	anti-parallel
Strand 3	G	868	873	anti-parallel
Strand 4	G	813	828	anti-parallel
Strand 5	G	801	808	anti-parallel
Strand 6	G	784	789	anti-parallel
Strand 7	G	775	779	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	63	67	first strand
Strand 2	G	78	82	anti-parallel
Strand 3	G	87	90	anti-parallel
Strand 4	G	95	97	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	107	first strand
Strand 2	G	515	525	anti-parallel
Strand 3	G	110	115	anti-parallel
Strand 4	G	464	465	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	107	first strand
Strand 2	G	515	525	anti-parallel
Strand 3	G	484	489	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	153	157	first strand
Strand 2	G	184	192	anti-parallel
Strand 3	G	201	205	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	218	222	first strand
Strand 2	G	283	287	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	226	230	first strand
Strand 2	G	258	263	anti-parallel
Strand 3	G	248	252	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	239	241	first strand
Strand 2	G	272	274	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	353	356	first strand
Strand 2	G	368	371	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	456	457	first strand
Strand 2	G	476	477	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	470	474	first strand
Strand 2	G	504	508	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	541	542	first strand
Strand 2	G	545	546	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	573	578	first strand
Strand 2	G	582	587	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	597	598	first strand
Strand 2	G	601	602	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	681	685	first strand
Strand 2	G	688	692	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	698	702	first strand
Strand 2	G	710	714	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	734	737	first strand
Strand 2	G	742	745	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	887	891	first strand
Strand 2	G	896	900	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	968	972	first strand
Strand 2	G	925	928	anti-parallel
Strand 3	G	997	999	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	932	933	first strand
Strand 2	G	991	992	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z47

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z47