Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z4L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z4L entry

There are 4 chains in PDB entry 7Z4L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
C 3 U 98
B
ASP 2LEU 1365
C
C -9 G 18
D
A -2 G 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7Z4L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
59 94Right-handed alpha
Helix 2
AA2
B
96 104Right-handed alpha
Helix 3
AA3
B
121 132Right-handed alpha
Helix 4
AA4
B
134 145Right-handed alpha
Helix 5
AA5
B
150 164Right-handed alpha
Helix 6
AA6
B
180 196Right-handed alpha
Helix 7
AA7
B
207 213Right-handed alpha
Helix 8
AA8
B
217 228Right-handed alpha
Helix 9
AA9
B
236 247Right-handed alpha
Helix 10
AB1
B
252 257Right-handed alpha
Helix 11
AB2
B
270 282Right-handed alpha
Helix 12
AB3
B
286 303Right-handed alpha
Helix 13
AB4
B
315 343Right-handed alpha
Helix 14
AB5
B
346 352Right-handed alpha
Helix 15
AB6
B
358 364Right-handed alpha
Helix 16
AB7
B
368 382Right-handed alpha
Helix 17
AB8
B
386 395Right-handed alpha
Helix 18
AB9
B
404 410Right-handed 310
Helix 19
AC1
B
411 427Right-handed alpha
Helix 20
AC2
B
430 436Right-handed alpha
Helix 21
AC3
B
436 446Right-handed alpha
Helix 22
AC4
B
477 481Right-handed alpha
Helix 23
AC5
B
484 494Right-handed alpha
Helix 24
AC6
B
512 525Right-handed alpha
Helix 25
AC7
B
541 552Right-handed alpha
Helix 26
AC8
B
560 568Right-handed alpha
Helix 27
AC9
B
591 602Right-handed alpha
Helix 28
AD1
B
604 609Right-handed alpha
Helix 29
AD2
B
612 626Right-handed alpha
Helix 30
AD3
B
628 637Right-handed alpha
Helix 31
AD4
B
638 640Right-handed 310
Helix 32
AD5
B
644 654Right-handed alpha
Helix 33
AD6
B
664 669Right-handed alpha
Helix 34
AD7
B
678 685Right-handed alpha
Helix 35
AD8
B
692 698Right-handed alpha
Helix 36
AD9
B
703 714Right-handed alpha
Helix 37
AE1
B
719 726Right-handed alpha
Helix 38
AE2
B
730 751Right-handed alpha
Helix 39
AE3
B
776 792Right-handed alpha
Helix 40
AE4
B
794 799Right-handed alpha
Helix 41
AE5
B
804 807Right-handed 310
Helix 42
AE6
B
808 817Right-handed alpha
Helix 43
AE7
B
851 853Right-handed 310
Helix 44
AE8
B
860 865Right-handed 310
Helix 45
AE9
B
872 889Right-handed alpha
Helix 46
AF1
B
893 901Right-handed alpha
Helix 47
AF2
B
909 920Right-handed alpha
Helix 48
AF3
B
925 940Right-handed alpha
Helix 49
AF4
B
959 970Right-handed alpha
Helix 50
AF5
B
980 1001Right-handed alpha
Helix 51
AF6
B
1004 1009Right-handed alpha
Helix 52
AF7
B
1032 1041Right-handed alpha
Helix 53
AF8
B
1078 1087Right-handed alpha
Helix 54
AF9
B
1127 1132Right-handed alpha
Helix 55
AG1
B
1170 1177Right-handed alpha
Helix 56
AG2
B
1177 1186Right-handed alpha
Helix 57
AG3
B
1229 1240Right-handed alpha
Helix 58
AG4
B
1248 1262Right-handed alpha
Helix 59
AG5
B
1264 1280Right-handed alpha
Helix 60
AG6
B
1283 1297Right-handed alpha
Helix 61
AG7
B
1301 1313Right-handed alpha
Helix 62
AG8
B
1340 1344Right-handed 310
Helix 63
AG9
B
1363 1365Right-handed 310
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There are 11 sheets in PDB entry 7Z4L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
954 957first strand
Strand 2
B
758 763parallel
Strand 3
B
6 11parallel
Strand 4
B
15 21anti-parallel
Strand 5
B
48 52anti-parallel
Strand 6
B
1093 1096parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
42 46first strand
Strand 2
B
29 36anti-parallel
Strand 3
B
1357 1361parallel
Strand 4
B
1346 1350anti-parallel
Strand 5
B
1202 1205anti-parallel
Strand 6
B
1211 1216anti-parallel
Strand 7
B
1219 1222anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
466 467first strand
Strand 2
B
482 483anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
507 509first strand
Strand 2
B
659 663anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
538 539first strand
Strand 2
B
528 531anti-parallel
Strand 3
B
578 581anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
837 840first strand
Strand 2
B
855 858anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1049 1050first strand
Strand 2
B
1058 1059anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1063 1065first strand
Strand 2
B
1072 1075anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1156 1163first strand
Strand 2
B
1139 1151anti-parallel
Strand 3
B
1166 1167anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1156 1163first strand
Strand 2
B
1139 1151anti-parallel
Strand 3
B
1196 1199anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1324 1326first strand
Strand 2
B
1329 1331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il