Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z5J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z5J entry

There are 5 chains in PDB entry 7Z5J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER 4	SER 270
A	THR 5	ALA 276
D	SER 4	SER 270
C	THR 5	ALA 276
F	SER 4	GLU 261

There are146 helices in PDB entry 7Z5J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	4	15	Right-handed alpha
Helix 2	AA2	B	19	28	Right-handed alpha
Helix 3	AA3	B	48	51	Right-handed 310
Helix 4	AA4	B	52	67	Right-handed alpha
Helix 5	AA5	B	79	92	Right-handed alpha
Helix 6	AA6	B	95	119	Right-handed alpha
Helix 7	AA7	B	120	122	Right-handed 310
Helix 8	AA8	B	152	156	Right-handed 310
Helix 9	AA9	B	168	180	Right-handed alpha
Helix 10	AB1	B	213	219	Right-handed alpha
Helix 11	AB2	B	228	235	Right-handed alpha
Helix 12	AB3	B	252	259	Right-handed alpha
Helix 13	AB4	A	22	31	Right-handed alpha
Helix 14	AB5	A	47	52	Right-handed alpha
Helix 15	AB6	A	54	69	Right-handed alpha
Helix 16	AB7	A	81	94	Right-handed alpha
Helix 17	AB8	A	97	121	Right-handed alpha
Helix 18	AB9	A	122	124	Right-handed 310
Helix 19	AC1	A	129	144	Right-handed alpha
Helix 20	AC2	A	169	182	Right-handed alpha
Helix 21	AC3	A	216	221	Right-handed alpha
Helix 22	AC4	A	230	237	Right-handed alpha
Helix 23	AC5	A	254	261	Right-handed alpha
Helix 24	AC6	D	5	15	Right-handed alpha
Helix 25	AC7	D	19	28	Right-handed alpha
Helix 26	AC8	D	48	51	Right-handed 310
Helix 27	AC9	D	52	67	Right-handed alpha
Helix 28	AD1	D	79	92	Right-handed alpha
Helix 29	AD2	D	95	119	Right-handed alpha
Helix 30	AD3	D	120	122	Right-handed 310
Helix 31	AD4	D	133	138	Right-handed alpha
Helix 32	AD5	D	152	156	Right-handed 310
Helix 33	AD6	D	168	180	Right-handed alpha
Helix 34	AD7	D	213	219	Right-handed alpha
Helix 35	AD8	D	227	235	Right-handed alpha
Helix 36	AD9	D	252	259	Right-handed alpha
Helix 37	AE1	C	22	31	Right-handed alpha
Helix 38	AE2	C	47	52	Right-handed alpha
Helix 39	AE3	C	54	69	Right-handed alpha
Helix 40	AE4	C	81	94	Right-handed alpha
Helix 41	AE5	C	97	121	Right-handed alpha
Helix 42	AE6	C	122	124	Right-handed 310
Helix 43	AE7	C	129	136	Right-handed alpha
Helix 44	AE8	C	136	144	Right-handed alpha
Helix 45	AE9	C	169	182	Right-handed alpha
Helix 46	AF1	C	216	221	Right-handed alpha
Helix 47	AF2	C	230	237	Right-handed alpha
Helix 48	AF3	C	254	261	Right-handed alpha
Helix 49	AF4	F	5	15	Right-handed alpha
Helix 50	AF5	F	19	28	Right-handed alpha
Helix 51	AF6	F	48	51	Right-handed 310
Helix 52	AF7	F	52	67	Right-handed alpha
Helix 53	AF8	F	79	92	Right-handed alpha
Helix 54	AF9	F	95	119	Right-handed alpha
Helix 55	AG1	F	120	122	Right-handed 310
Helix 56	AG2	F	132	137	Right-handed alpha
Helix 57	AG3	F	152	156	Right-handed 310
Helix 58	AG4	F	168	180	Right-handed alpha
Helix 59	AG5	F	213	219	Right-handed alpha
Helix 60	AG6	F	227	236	Right-handed alpha
Helix 61	AG7	F	252	259	Right-handed alpha
Helix 62	AG8	E	22	31	Right-handed alpha
Helix 63	AG9	E	47	52	Right-handed alpha
Helix 64	AH1	E	54	69	Right-handed alpha
Helix 65	AH2	E	81	94	Right-handed alpha
Helix 66	AH3	E	97	121	Right-handed alpha
Helix 67	AH4	E	122	124	Right-handed 310
Helix 68	AH5	E	130	136	Right-handed alpha
Helix 69	AH6	E	136	144	Right-handed alpha
Helix 70	AH7	E	169	182	Right-handed alpha
Helix 71	AH8	E	204	208	Right-handed 310
Helix 72	AH9	E	216	222	Right-handed alpha
Helix 73	AI1	E	229	237	Right-handed alpha
Helix 74	AI2	E	254	261	Right-handed alpha
Helix 75	AI3	H	5	13	Right-handed alpha
Helix 76	AI4	H	19	28	Right-handed alpha
Helix 77	AI5	H	48	51	Right-handed 310
Helix 78	AI6	H	52	67	Right-handed alpha
Helix 79	AI7	H	79	92	Right-handed alpha
Helix 80	AI8	H	95	118	Right-handed alpha
Helix 81	AI9	H	119	122	Right-handed 310
Helix 82	AJ1	H	132	138	Right-handed alpha
Helix 83	AJ2	H	168	180	Right-handed alpha
Helix 84	AJ3	H	213	219	Right-handed alpha
Helix 85	AJ4	H	227	235	Right-handed alpha
Helix 86	AJ5	H	252	259	Right-handed alpha
Helix 87	AJ6	I	22	31	Right-handed alpha
Helix 88	AJ7	I	47	52	Right-handed alpha
Helix 89	AJ8	I	54	69	Right-handed alpha
Helix 90	AJ9	I	82	95	Right-handed alpha
Helix 91	AK1	I	97	119	Right-handed alpha
Helix 92	AK2	I	120	124	Right-handed 310
Helix 93	AK3	I	129	136	Right-handed alpha
Helix 94	AK4	I	136	144	Right-handed alpha
Helix 95	AK5	I	169	182	Right-handed alpha
Helix 96	AK6	I	216	221	Right-handed alpha
Helix 97	AK7	I	230	238	Right-handed alpha
Helix 98	AK8	I	254	260	Right-handed alpha
Helix 99	AK9	J	5	13	Right-handed alpha
Helix 100	AL1	J	19	28	Right-handed alpha
Helix 101	AL2	J	48	51	Right-handed 310
Helix 102	AL3	J	52	67	Right-handed alpha
Helix 103	AL4	J	79	92	Right-handed alpha
Helix 104	AL5	J	95	119	Right-handed alpha
Helix 105	AL6	J	120	122	Right-handed 310
Helix 106	AL7	J	133	138	Right-handed alpha
Helix 107	AL8	J	168	180	Right-handed alpha
Helix 108	AL9	J	213	219	Right-handed alpha
Helix 109	AM1	J	227	236	Right-handed alpha
Helix 110	AM2	J	252	259	Right-handed alpha
Helix 111	AM3	G	22	31	Right-handed alpha
Helix 112	AM4	G	47	52	Right-handed alpha
Helix 113	AM5	G	54	69	Right-handed alpha
Helix 114	AM6	G	81	94	Right-handed alpha
Helix 115	AM7	G	97	119	Right-handed alpha
Helix 116	AM8	G	120	124	Right-handed 310
Helix 117	AM9	G	129	144	Right-handed alpha
Helix 118	AN1	G	155	159	Right-handed 310
Helix 119	AN2	G	169	182	Right-handed alpha
Helix 120	AN3	G	216	221	Right-handed alpha
Helix 121	AN4	G	229	238	Right-handed alpha
Helix 122	AN5	G	254	260	Right-handed alpha
Helix 123	AN6	L	5	15	Right-handed alpha
Helix 124	AN7	L	19	28	Right-handed alpha
Helix 125	AN8	L	48	51	Right-handed 310
Helix 126	AN9	L	52	67	Right-handed alpha
Helix 127	AO1	L	79	92	Right-handed alpha
Helix 128	AO2	L	95	119	Right-handed alpha
Helix 129	AO3	L	132	138	Right-handed alpha
Helix 130	AO4	L	152	156	Right-handed 310
Helix 131	AO5	L	168	180	Right-handed alpha
Helix 132	AO6	L	213	219	Right-handed alpha
Helix 133	AO7	L	227	235	Right-handed alpha
Helix 134	AO8	L	252	259	Right-handed alpha
Helix 135	AO9	K	22	31	Right-handed alpha
Helix 136	AP1	K	47	52	Right-handed alpha
Helix 137	AP2	K	54	69	Right-handed alpha
Helix 138	AP3	K	82	94	Right-handed alpha
Helix 139	AP4	K	97	119	Right-handed alpha
Helix 140	AP5	K	120	124	Right-handed 310
Helix 141	AP6	K	129	144	Right-handed alpha
Helix 142	AP7	K	169	182	Right-handed alpha
Helix 143	AP8	K	204	208	Right-handed 310
Helix 144	AP9	K	216	221	Right-handed alpha
Helix 145	AQ1	K	229	238	Right-handed alpha
Helix 146	AQ2	K	254	260	Right-handed alpha

There are 22 sheets in PDB entry 7Z5J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	147	first strand
Strand 2	B	71	76	parallel
Strand 3	B	38	43	parallel
Strand 4	B	184	189	parallel
Strand 5	B	242	247	parallel
Strand 6	B	265	268	anti-parallel
Strand 7	B	210	212	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	195	first strand
Strand 2	B	207	208	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	150	first strand
Strand 2	A	74	78	parallel
Strand 3	A	42	46	parallel
Strand 4	A	185	190	parallel
Strand 5	A	244	249	parallel
Strand 6	A	267	270	anti-parallel
Strand 7	A	213	215	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	196	first strand
Strand 2	A	210	211	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	147	first strand
Strand 2	D	71	76	parallel
Strand 3	D	38	43	parallel
Strand 4	D	184	189	parallel
Strand 5	D	242	247	parallel
Strand 6	D	265	268	anti-parallel
Strand 7	D	210	212	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	195	first strand
Strand 2	D	207	208	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	150	first strand
Strand 2	C	74	78	parallel
Strand 3	C	42	46	parallel
Strand 4	C	185	190	parallel
Strand 5	C	244	249	parallel
Strand 6	C	267	270	anti-parallel
Strand 7	C	213	215	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	143	147	first strand
Strand 2	F	71	76	parallel
Strand 3	F	38	43	parallel
Strand 4	F	184	189	parallel
Strand 5	F	242	247	parallel
Strand 6	F	265	268	anti-parallel
Strand 7	F	210	212	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	194	195	first strand
Strand 2	F	207	208	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	150	first strand
Strand 2	E	74	78	parallel
Strand 3	E	42	46	parallel
Strand 4	E	185	190	parallel
Strand 5	E	244	249	parallel
Strand 6	E	267	270	anti-parallel
Strand 7	E	213	215	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	195	196	first strand
Strand 2	E	210	211	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	125	126	first strand
Strand 2	H	143	147	parallel
Strand 3	H	71	76	parallel
Strand 4	H	38	43	parallel
Strand 5	H	184	189	parallel
Strand 6	H	242	247	parallel
Strand 7	H	265	268	anti-parallel
Strand 8	H	210	212	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	194	195	first strand
Strand 2	H	207	208	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	150	first strand
Strand 2	I	74	78	parallel
Strand 3	I	42	46	parallel
Strand 4	I	185	190	parallel
Strand 5	I	244	249	parallel
Strand 6	I	267	270	anti-parallel
Strand 7	I	213	215	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	195	196	first strand
Strand 2	I	210	211	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	143	146	first strand
Strand 2	J	71	76	parallel
Strand 3	J	38	43	parallel
Strand 4	J	184	189	parallel
Strand 5	J	242	247	parallel
Strand 6	J	265	268	anti-parallel
Strand 7	J	210	212	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	194	195	first strand
Strand 2	J	207	208	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	150	first strand
Strand 2	G	74	78	parallel
Strand 3	G	42	46	parallel
Strand 4	G	185	190	parallel
Strand 5	G	244	249	parallel
Strand 6	G	267	270	anti-parallel
Strand 7	G	213	215	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	143	146	first strand
Strand 2	L	71	76	parallel
Strand 3	L	38	43	parallel
Strand 4	L	184	189	parallel
Strand 5	L	242	247	parallel
Strand 6	L	265	268	anti-parallel
Strand 7	L	210	212	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	194	195	first strand
Strand 2	L	207	208	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	150	first strand
Strand 2	K	74	78	parallel
Strand 3	K	42	46	parallel
Strand 4	K	185	190	parallel
Strand 5	K	244	249	parallel
Strand 6	K	267	270	anti-parallel
Strand 7	K	213	215	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	195	196	first strand
Strand 2	K	210	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z5J

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z5J