Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z5P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z5P entry

There are 2 chains in PDB entry 7Z5P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 2	ILE 509
B	ASN 2	ILE 509

There are 16 helices in PDB entry 7Z5P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	110	114	Right-handed 310
Helix 2	AA2	A	122	126	Right-handed 310
Helix 3	AA3	A	157	164	Right-handed alpha
Helix 4	AA4	A	177	181	Right-handed 310
Helix 5	AA5	A	184	186	Right-handed 310
Helix 6	AA6	A	213	217	Right-handed 310
Helix 7	AA7	A	307	310	Right-handed 310
Helix 8	AA8	A	438	444	Right-handed alpha
Helix 9	AA9	A	494	500	Right-handed alpha
Helix 10	AB1	B	110	114	Right-handed 310
Helix 11	AB2	B	122	126	Right-handed 310
Helix 12	AB3	B	157	164	Right-handed alpha
Helix 13	AB4	B	176	181	Right-handed 310
Helix 14	AB5	B	184	186	Right-handed 310
Helix 15	AB6	B	439	444	Right-handed alpha
Helix 16	AB7	B	494	499	Right-handed alpha

There are 14 sheets in PDB entry 7Z5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	21	first strand
Strand 2	A	26	37	anti-parallel
Strand 3	A	46	51	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	21	first strand
Strand 2	A	26	37	anti-parallel
Strand 3	A	68	75	parallel
Strand 4	A	137	139	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	63	first strand
Strand 2	A	167	173	parallel
Strand 3	A	146	152	anti-parallel
Strand 4	A	102	105	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	239	first strand
Strand 2	A	232	235	anti-parallel
Strand 3	A	188	196	anti-parallel
Strand 4	A	249	256	parallel
Strand 5	A	299	305	anti-parallel
Strand 6	A	274	278	anti-parallel
Strand 7	A	281	287	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	333	338	parallel
Strand 3	A	313	318	anti-parallel
Strand 4	A	263	267	anti-parallel
Strand 5	A	291	294	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	388	first strand
Strand 2	A	368	378	anti-parallel
Strand 3	A	406	413	parallel
Strand 4	A	473	480	anti-parallel
Strand 5	A	429	435	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	468	first strand
Strand 2	A	420	423	anti-parallel
Strand 3	A	486	492	anti-parallel
Strand 4	A	503	508	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	21	first strand
Strand 2	B	26	37	anti-parallel
Strand 3	B	46	51	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	21	first strand
Strand 2	B	26	37	anti-parallel
Strand 3	B	68	75	parallel
Strand 4	B	136	139	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	63	first strand
Strand 2	B	167	173	parallel
Strand 3	B	146	152	anti-parallel
Strand 4	B	102	105	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	239	first strand
Strand 2	B	232	235	anti-parallel
Strand 3	B	188	196	anti-parallel
Strand 4	B	249	256	parallel
Strand 5	B	299	305	anti-parallel
Strand 6	B	274	278	anti-parallel
Strand 7	B	281	288	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	245	first strand
Strand 2	B	333	339	parallel
Strand 3	B	313	318	anti-parallel
Strand 4	B	263	267	anti-parallel
Strand 5	B	291	294	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	385	388	first strand
Strand 2	B	368	377	anti-parallel
Strand 3	B	406	413	parallel
Strand 4	B	473	480	anti-parallel
Strand 5	B	429	435	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	469	first strand
Strand 2	B	419	423	anti-parallel
Strand 3	B	486	492	anti-parallel
Strand 4	B	503	508	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z5P

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z5P