Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z5U entry

There is 1 chain in PDB entry 7Z5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 398ASN 789
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 7Z5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
398 411Right-handed alpha
Helix 2
AA2
A
431 454Right-handed alpha
Helix 3
AA3
A
463 467Right-handed 310
Helix 4
AA4
A
475 482Right-handed alpha
Helix 5
AA5
A
498 500Right-handed 310
Helix 6
AA6
A
516 534Right-handed alpha
Helix 7
AA7
A
542 546Right-handed 310
Helix 8
AA8
A
550 562Right-handed alpha
Helix 9
AA9
A
573 583Right-handed alpha
Helix 10
AB1
A
584 588Right-handed 310
Helix 11
AB2
A
590 596Right-handed alpha
Helix 12
AB3
A
605 621Right-handed alpha
Helix 13
AB4
A
621 634Right-handed alpha
Helix 14
AB5
A
636 650Right-handed alpha
Helix 15
AB6
A
650 667Right-handed alpha
Helix 16
AB7
A
677 682Right-handed 310
Helix 17
AB8
A
688 701Right-handed alpha
Helix 18
AB9
A
731 753Right-handed alpha
Helix 19
AC1
A
755 761Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 7Z5U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 417first strand
Strand 2
A
422 426anti-parallel
Strand 3
A
468 473parallel
Strand 4
A
502 506parallel
Strand 5
A
495 497anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 711first strand
Strand 2
A
716 728anti-parallel
Strand 3
A
775 786anti-parallel
Strand 4
A
762 770anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il