Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z6Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z6Q entry

There are 12 chains in PDB entry 7Z6Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 42	VAL 708
B	LYS 60	GLU 229
C	SER 5	LYS 125
D	ALA 18	LYS 143
E	ASP 8	GLN 366
F	ASP 8	GLN 366
G	ASP 8	GLN 366
H	VAL 9	GLN 366
I	ASP 8	GLN 366
J	ASP 8	TYR 364
a	GLU 55	VAL 708
c	SER 5	LYS 125

There are122 helices in PDB entry 7Z6Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	51	Right-handed alpha
Helix 2	AA2	A	60	64	Right-handed 310
Helix 3	AA3	A	66	70	Right-handed 310
Helix 4	AA4	A	71	91	Right-handed alpha
Helix 5	AA5	A	91	96	Right-handed alpha
Helix 6	AA6	A	111	116	Right-handed alpha
Helix 7	AA7	A	117	124	Right-handed alpha
Helix 8	AA8	A	132	166	Right-handed alpha
Helix 9	AA9	A	187	195	Right-handed alpha
Helix 10	AB1	A	201	227	Right-handed alpha
Helix 11	AB2	A	240	263	Right-handed alpha
Helix 12	AB3	A	268	273	Right-handed 310
Helix 13	AB4	A	274	301	Right-handed alpha
Helix 14	AB5	A	303	307	Right-handed 310
Helix 15	AB6	A	310	316	Right-handed 310
Helix 16	AB7	A	358	363	Right-handed alpha
Helix 17	AB8	A	363	402	Right-handed alpha
Helix 18	AB9	A	403	407	Right-handed 310
Helix 19	AC1	A	409	414	Right-handed alpha
Helix 20	AC2	A	417	452	Right-handed alpha
Helix 21	AC3	A	453	456	Right-handed 310
Helix 22	AC4	A	457	461	Right-handed 310
Helix 23	AC5	A	468	475	Right-handed 310
Helix 24	AC6	A	479	506	Right-handed alpha
Helix 25	AC7	A	510	516	Right-handed alpha
Helix 26	AC8	A	539	551	Right-handed alpha
Helix 27	AC9	A	553	562	Right-handed alpha
Helix 28	AD1	A	578	580	Right-handed 310
Helix 29	AD2	A	581	586	Right-handed alpha
Helix 30	AD3	A	597	610	Right-handed alpha
Helix 31	AD4	A	612	632	Right-handed alpha
Helix 32	AD5	A	634	657	Right-handed alpha
Helix 33	AD6	A	669	695	Right-handed alpha
Helix 34	AD7	B	144	150	Right-handed alpha
Helix 35	AD8	B	164	168	Right-handed 310
Helix 36	AD9	B	183	188	Right-handed alpha
Helix 37	AE1	C	7	32	Right-handed alpha
Helix 38	AE2	C	42	71	Right-handed alpha
Helix 39	AE3	C	76	99	Right-handed alpha
Helix 40	AE4	C	115	125	Right-handed alpha
Helix 41	AE5	D	63	72	Right-handed alpha
Helix 42	AE6	D	89	101	Right-handed alpha
Helix 43	AE7	D	137	142	Right-handed alpha
Helix 44	AE8	E	127	134	Right-handed alpha
Helix 45	AE9	E	156	173	Right-handed alpha
Helix 46	AF1	E	175	185	Right-handed alpha
Helix 47	AF2	E	188	196	Right-handed alpha
Helix 48	AF3	E	233	238	Right-handed alpha
Helix 49	AF4	E	291	303	Right-handed alpha
Helix 50	AF5	E	344	354	Right-handed alpha
Helix 51	AF6	F	127	134	Right-handed alpha
Helix 52	AF7	F	156	173	Right-handed alpha
Helix 53	AF8	F	175	185	Right-handed alpha
Helix 54	AF9	F	188	196	Right-handed alpha
Helix 55	AG1	F	233	238	Right-handed alpha
Helix 56	AG2	F	291	303	Right-handed alpha
Helix 57	AG3	F	344	354	Right-handed alpha
Helix 58	AG4	G	127	134	Right-handed alpha
Helix 59	AG5	G	156	173	Right-handed alpha
Helix 60	AG6	G	175	185	Right-handed alpha
Helix 61	AG7	G	188	196	Right-handed alpha
Helix 62	AG8	G	233	238	Right-handed alpha
Helix 63	AG9	G	291	303	Right-handed alpha
Helix 64	AH1	G	342	354	Right-handed alpha
Helix 65	AH2	H	127	134	Right-handed alpha
Helix 66	AH3	H	156	173	Right-handed alpha
Helix 67	AH4	H	175	185	Right-handed alpha
Helix 68	AH5	H	188	196	Right-handed alpha
Helix 69	AH6	H	233	238	Right-handed alpha
Helix 70	AH7	H	291	303	Right-handed alpha
Helix 71	AH8	H	344	354	Right-handed alpha
Helix 72	AH9	I	127	134	Right-handed alpha
Helix 73	AI1	I	156	173	Right-handed alpha
Helix 74	AI2	I	175	185	Right-handed alpha
Helix 75	AI3	I	188	196	Right-handed alpha
Helix 76	AI4	I	233	238	Right-handed alpha
Helix 77	AI5	I	291	303	Right-handed alpha
Helix 78	AI6	I	344	354	Right-handed alpha
Helix 79	AI7	J	127	134	Right-handed alpha
Helix 80	AI8	J	156	173	Right-handed alpha
Helix 81	AI9	J	175	185	Right-handed alpha
Helix 82	AJ1	J	188	196	Right-handed alpha
Helix 83	AJ2	J	233	238	Right-handed alpha
Helix 84	AJ3	J	291	303	Right-handed alpha
Helix 85	AJ4	J	342	354	Right-handed alpha
Helix 86	AJ5	a	60	64	Right-handed 310
Helix 87	AJ6	a	66	70	Right-handed 310
Helix 88	AJ7	a	71	91	Right-handed alpha
Helix 89	AJ8	a	91	96	Right-handed alpha
Helix 90	AJ9	a	111	116	Right-handed alpha
Helix 91	AK1	a	117	124	Right-handed alpha
Helix 92	AK2	a	132	167	Right-handed alpha
Helix 93	AK3	a	187	194	Right-handed alpha
Helix 94	AK4	a	201	227	Right-handed alpha
Helix 95	AK5	a	240	263	Right-handed alpha
Helix 96	AK6	a	268	273	Right-handed 310
Helix 97	AK7	a	274	301	Right-handed alpha
Helix 98	AK8	a	303	307	Right-handed 310
Helix 99	AK9	a	310	316	Right-handed 310
Helix 100	AL1	a	358	363	Right-handed alpha
Helix 101	AL2	a	363	401	Right-handed alpha
Helix 102	AL3	a	403	407	Right-handed 310
Helix 103	AL4	a	409	414	Right-handed alpha
Helix 104	AL5	a	417	437	Right-handed alpha
Helix 105	AL6	a	437	452	Right-handed alpha
Helix 106	AL7	a	471	475	Right-handed 310
Helix 107	AL8	a	479	506	Right-handed alpha
Helix 108	AL9	a	512	517	Right-handed alpha
Helix 109	AM1	a	530	534	Right-handed 310
Helix 110	AM2	a	539	552	Right-handed alpha
Helix 111	AM3	a	553	563	Right-handed alpha
Helix 112	AM4	a	578	580	Right-handed 310
Helix 113	AM5	a	581	586	Right-handed alpha
Helix 114	AM6	a	597	610	Right-handed alpha
Helix 115	AM7	a	612	632	Right-handed alpha
Helix 116	AM8	a	634	657	Right-handed alpha
Helix 117	AM9	a	669	688	Right-handed alpha
Helix 118	AN1	a	688	695	Right-handed alpha
Helix 119	AN2	c	7	32	Right-handed alpha
Helix 120	AN3	c	42	71	Right-handed alpha
Helix 121	AN4	c	76	99	Right-handed alpha
Helix 122	AN5	c	115	125	Right-handed alpha

There are 23 sheets in PDB entry 7Z6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	135	first strand
Strand 2	B	196	199	anti-parallel
Strand 3	B	205	206	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	161	first strand
Strand 2	B	170	174	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	53	first strand
Strand 2	D	32	38	anti-parallel
Strand 3	D	75	80	parallel
Strand 4	D	116	122	anti-parallel
Strand 5	D	126	128	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	200	first strand
Strand 2	E	218	229	anti-parallel
Strand 3	E	204	211	anti-parallel

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There are 15 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	200	first strand
Strand 2	E	218	229	anti-parallel
Strand 3	E	142	153	anti-parallel
Strand 4	E	109	123	anti-parallel
Strand 5	E	95	106	anti-parallel
Strand 6	E	78	90	anti-parallel
Strand 7	E	65	75	anti-parallel
Strand 8	E	47	57	anti-parallel
Strand 9	E	252	260	anti-parallel
Strand 10	E	265	273	anti-parallel
Strand 11	E	28	36	anti-parallel
Strand 12	E	10	20	anti-parallel
Strand 13	E	307	316	parallel
Strand 14	E	337	341	anti-parallel
Strand 15	E	332	334	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	277	281	first strand
Strand 2	E	284	287	anti-parallel
Strand 3	E	361	365	anti-parallel
Strand 4	E	322	327	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	200	first strand
Strand 2	F	218	229	anti-parallel
Strand 3	F	204	211	anti-parallel

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There are 15 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	200	first strand
Strand 2	F	218	229	anti-parallel
Strand 3	F	142	153	anti-parallel
Strand 4	F	109	123	anti-parallel
Strand 5	F	95	106	anti-parallel
Strand 6	F	78	90	anti-parallel
Strand 7	F	65	75	anti-parallel
Strand 8	F	47	57	anti-parallel
Strand 9	F	252	261	anti-parallel
Strand 10	F	264	273	anti-parallel
Strand 11	F	28	36	anti-parallel
Strand 12	F	10	20	anti-parallel
Strand 13	F	307	316	parallel
Strand 14	F	337	341	anti-parallel
Strand 15	F	332	334	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	277	281	first strand
Strand 2	F	284	287	anti-parallel
Strand 3	F	361	365	anti-parallel
Strand 4	F	322	327	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	200	first strand
Strand 2	G	217	229	anti-parallel
Strand 3	G	204	212	anti-parallel

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There are 15 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	200	first strand
Strand 2	G	217	229	anti-parallel
Strand 3	G	142	153	anti-parallel
Strand 4	G	109	123	anti-parallel
Strand 5	G	95	106	anti-parallel
Strand 6	G	78	90	anti-parallel
Strand 7	G	65	75	anti-parallel
Strand 8	G	47	57	anti-parallel
Strand 9	G	252	261	anti-parallel
Strand 10	G	264	273	anti-parallel
Strand 11	G	28	36	anti-parallel
Strand 12	G	11	20	anti-parallel
Strand 13	G	308	316	parallel
Strand 14	G	337	341	anti-parallel
Strand 15	G	332	334	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	277	281	first strand
Strand 2	G	284	287	anti-parallel
Strand 3	G	361	365	anti-parallel
Strand 4	G	322	327	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	200	first strand
Strand 2	H	218	229	anti-parallel
Strand 3	H	204	211	anti-parallel

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There are 15 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	200	first strand
Strand 2	H	218	229	anti-parallel
Strand 3	H	142	153	anti-parallel
Strand 4	H	109	123	anti-parallel
Strand 5	H	95	106	anti-parallel
Strand 6	H	78	90	anti-parallel
Strand 7	H	65	75	anti-parallel
Strand 8	H	47	57	anti-parallel
Strand 9	H	252	261	anti-parallel
Strand 10	H	264	273	anti-parallel
Strand 11	H	28	36	anti-parallel
Strand 12	H	11	20	anti-parallel
Strand 13	H	308	316	parallel
Strand 14	H	337	341	anti-parallel
Strand 15	H	332	334	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	277	281	first strand
Strand 2	H	284	287	anti-parallel
Strand 3	H	361	365	anti-parallel
Strand 4	H	322	327	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	198	200	first strand
Strand 2	I	218	229	anti-parallel
Strand 3	I	204	211	anti-parallel

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There are 15 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	198	200	first strand
Strand 2	I	218	229	anti-parallel
Strand 3	I	142	153	anti-parallel
Strand 4	I	109	123	anti-parallel
Strand 5	I	95	106	anti-parallel
Strand 6	I	78	90	anti-parallel
Strand 7	I	65	75	anti-parallel
Strand 8	I	47	57	anti-parallel
Strand 9	I	252	261	anti-parallel
Strand 10	I	264	273	anti-parallel
Strand 11	I	28	36	anti-parallel
Strand 12	I	10	20	anti-parallel
Strand 13	I	307	316	parallel
Strand 14	I	337	341	anti-parallel
Strand 15	I	332	334	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	277	281	first strand
Strand 2	I	284	287	anti-parallel
Strand 3	I	361	365	anti-parallel
Strand 4	I	322	327	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	198	200	first strand
Strand 2	J	217	229	anti-parallel
Strand 3	J	204	212	anti-parallel

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There are 15 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	198	200	first strand
Strand 2	J	217	229	anti-parallel
Strand 3	J	142	153	anti-parallel
Strand 4	J	109	123	anti-parallel
Strand 5	J	95	106	anti-parallel
Strand 6	J	78	90	anti-parallel
Strand 7	J	64	75	anti-parallel
Strand 8	J	47	59	anti-parallel
Strand 9	J	252	261	anti-parallel
Strand 10	J	264	273	anti-parallel
Strand 11	J	28	36	anti-parallel
Strand 12	J	11	20	anti-parallel
Strand 13	J	308	316	parallel
Strand 14	J	337	341	anti-parallel
Strand 15	J	332	334	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	277	281	first strand
Strand 2	J	284	287	anti-parallel
Strand 3	J	361	364	anti-parallel
Strand 4	J	325	327	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	170	171	first strand
Strand 2	a	176	177	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	333	334	first strand
Strand 2	a	339	340	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z6Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z6Q