Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z6R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z6R entry

There are 4 chains in PDB entry 7Z6R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 387
B	MET 1	VAL 387
C	PHE 21	ILE 227
D	PHE 21	ASN 228

There are 47 helices in PDB entry 7Z6R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	31	Right-handed alpha
Helix 2	AA2	A	44	48	Right-handed alpha
Helix 3	AA3	A	52	59	Right-handed alpha
Helix 4	AA4	A	77	89	Right-handed alpha
Helix 5	AA5	A	129	145	Right-handed alpha
Helix 6	AA6	A	159	168	Right-handed alpha
Helix 7	AA7	A	176	185	Right-handed alpha
Helix 8	AA8	A	187	195	Right-handed alpha
Helix 9	AA9	A	200	211	Right-handed alpha
Helix 10	AB1	A	213	221	Right-handed alpha
Helix 11	AB2	A	231	250	Right-handed alpha
Helix 12	AB3	A	312	318	Right-handed 310
Helix 13	AB4	A	329	335	Right-handed alpha
Helix 14	AB5	A	337	354	Right-handed alpha
Helix 15	AB6	B	11	31	Right-handed alpha
Helix 16	AB7	B	44	48	Right-handed alpha
Helix 17	AB8	B	52	59	Right-handed alpha
Helix 18	AB9	B	77	89	Right-handed alpha
Helix 19	AC1	B	129	145	Right-handed alpha
Helix 20	AC2	B	159	169	Right-handed alpha
Helix 21	AC3	B	172	185	Right-handed alpha
Helix 22	AC4	B	187	198	Right-handed alpha
Helix 23	AC5	B	200	211	Right-handed alpha
Helix 24	AC6	B	213	221	Right-handed alpha
Helix 25	AC7	B	222	228	Right-handed alpha
Helix 26	AC8	B	228	250	Right-handed alpha
Helix 27	AC9	B	312	318	Right-handed 310
Helix 28	AD1	B	329	335	Right-handed alpha
Helix 29	AD2	B	337	354	Right-handed alpha
Helix 30	AD3	C	31	43	Right-handed alpha
Helix 31	AD4	C	73	75	Right-handed 310
Helix 32	AD5	C	76	83	Right-handed alpha
Helix 33	AD6	C	93	100	Right-handed alpha
Helix 34	AD7	C	138	149	Right-handed alpha
Helix 35	AD8	C	163	168	Right-handed alpha
Helix 36	AD9	C	181	187	Right-handed alpha
Helix 37	AE1	C	206	212	Right-handed alpha
Helix 38	AE2	C	212	227	Right-handed alpha
Helix 39	AE3	D	33	43	Right-handed alpha
Helix 40	AE4	D	73	75	Right-handed 310
Helix 41	AE5	D	76	83	Right-handed alpha
Helix 42	AE6	D	93	100	Right-handed alpha
Helix 43	AE7	D	138	149	Right-handed alpha
Helix 44	AE8	D	163	168	Right-handed alpha
Helix 45	AE9	D	181	187	Right-handed alpha
Helix 46	AF1	D	206	212	Right-handed alpha
Helix 47	AF2	D	212	228	Right-handed alpha

There are 10 sheets in PDB entry 7Z6R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	10	first strand
Strand 2	B	34	37	anti-parallel
Strand 3	B	94	101	parallel
Strand 4	B	117	124	anti-parallel
Strand 5	B	303	310	anti-parallel
Strand 6	B	283	289	anti-parallel
Strand 7	B	266	275	anti-parallel
Strand 8	B	152	158	anti-parallel
Strand 9	B	253	255	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	255	first strand
Strand 2	A	152	158	parallel
Strand 3	A	266	275	anti-parallel
Strand 4	A	283	289	anti-parallel
Strand 5	A	303	310	anti-parallel
Strand 6	A	117	124	anti-parallel
Strand 7	A	94	101	anti-parallel
Strand 8	A	34	37	parallel
Strand 9	B	9	10	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	43	first strand
Strand 2	A	70	73	anti-parallel
Strand 3	A	60	63	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	359	first strand
Strand 2	A	325	328	parallel
Strand 3	A	373	377	parallel
Strand 4	A	382	386	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	43	first strand
Strand 2	B	70	73	anti-parallel
Strand 3	B	60	63	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	359	first strand
Strand 2	B	325	328	parallel
Strand 3	B	373	377	parallel
Strand 4	B	382	386	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	67	72	anti-parallel
Strand 3	C	24	29	parallel
Strand 4	C	88	92	parallel
Strand 5	C	200	205	anti-parallel
Strand 6	C	104	109	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	157	first strand
Strand 2	C	132	136	parallel
Strand 3	C	173	178	parallel
Strand 4	C	115	122	anti-parallel
Strand 5	C	189	198	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	60	first strand
Strand 2	D	67	71	anti-parallel
Strand 3	D	24	28	parallel
Strand 4	D	88	92	parallel
Strand 5	D	200	205	anti-parallel
Strand 6	D	104	109	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	157	first strand
Strand 2	D	133	136	parallel
Strand 3	D	173	178	parallel
Strand 4	D	115	122	anti-parallel
Strand 5	D	189	198	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z6R

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z6R