Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z7E entry

There are 2 chains in PDB entry 7Z7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 125ILE 321
B
 SER 2ALA 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7Z7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
134 138Right-handed 310
Helix 2
AA2
A
195 199Right-handed 310
Helix 3
AA3
A
206 212Right-handed alpha
Helix 4
AA4
A
309 320Right-handed alpha
Helix 5
AA5
B
3 15Right-handed alpha
Helix 6
AA6
B
16 26Right-handed alpha
Helix 7
AA7
B
39 48Right-handed alpha
Helix 8
AA8
B
49 59Right-handed alpha
Helix 9
AA9
B
72 81Right-handed alpha
Helix 10
AB1
B
82 92Right-handed alpha
Helix 11
AB2
B
105 114Right-handed alpha
Helix 12
AB3
B
115 125Right-handed alpha
Helix 13
AB4
B
138 146Right-handed alpha
Helix 14
AB5
B
148 158Right-handed alpha
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There are 2 sheets in PDB entry 7Z7E. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
171 176anti-parallel
Strand 3
A
262 268anti-parallel
Strand 4
A
227 230anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
162 165anti-parallel
Strand 3
A
296 306parallel
Strand 4
A
283 290anti-parallel
Strand 5
A
186 193anti-parallel
Strand 6
A
246 251anti-parallel
Strand 7
A
236 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il