Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z87


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z87 entry

There are 5 chains in PDB entry 7Z87 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 7MET 4128
B
LYS 31TYR 534
C
ASN 6ILE 732
D
C 1 T 26
E
A 18 G 43
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are244 helices in PDB entry 7Z87. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
26 45Right-handed alpha
Helix 3
AA3
A
47 59Right-handed alpha
Helix 4
AA4
A
64 72Right-handed alpha
Helix 5
AA5
A
75 77Right-handed 310
Helix 6
AA6
A
78 96Right-handed alpha
Helix 7
AA7
A
97 102Right-handed 310
Helix 8
AA8
A
103 118Right-handed alpha
Helix 9
AA9
A
120 138Right-handed alpha
Helix 10
AB1
A
142 147Right-handed alpha
Helix 11
AB2
A
148 160Right-handed alpha
Helix 12
AB3
A
170 184Right-handed alpha
Helix 13
AB4
A
185 189Right-handed 310
Helix 14
AB5
A
192 210Right-handed alpha
Helix 15
AB6
A
216 231Right-handed alpha
Helix 16
AB7
A
243 257Right-handed alpha
Helix 17
AB8
A
266 279Right-handed alpha
Helix 18
AB9
A
283 288Right-handed alpha
Helix 19
AC1
A
289 302Right-handed alpha
Helix 20
AC2
A
307 330Right-handed alpha
Helix 21
AC3
A
334 351Right-handed alpha
Helix 22
AC4
A
355 377Right-handed alpha
Helix 23
AC5
A
379 384Right-handed alpha
Helix 24
AC6
A
386 397Right-handed alpha
Helix 25
AC7
A
409 422Right-handed alpha
Helix 26
AC8
A
431 445Right-handed alpha
Helix 27
AC9
A
453 469Right-handed alpha
Helix 28
AD1
A
472 492Right-handed alpha
Helix 29
AD2
A
524 526Right-handed 310
Helix 30
AD3
A
527 535Right-handed alpha
Helix 31
AD4
A
559 578Right-handed alpha
Helix 32
AD5
A
616 634Right-handed alpha
Helix 33
AD6
A
642 644Right-handed 310
Helix 34
AD7
A
645 659Right-handed alpha
Helix 35
AD8
A
665 680Right-handed alpha
Helix 36
AD9
A
700 718Right-handed alpha
Helix 37
AE1
A
719 721Right-handed 310
Helix 38
AE2
A
722 736Right-handed alpha
Helix 39
AE3
A
744 747Right-handed 310
Helix 40
AE4
A
748 759Right-handed alpha
Helix 41
AE5
A
762 780Right-handed alpha
Helix 42
AE6
A
785 787Right-handed 310
Helix 43
AE7
A
788 793Right-handed alpha
Helix 44
AE8
A
794 800Right-handed 310
Helix 45
AE9
A
816 823Right-handed alpha
Helix 46
AF1
A
827 839Right-handed alpha
Helix 47
AF2
A
847 862Right-handed alpha
Helix 48
AF3
A
865 870Right-handed 310
Helix 49
AF4
A
876 882Right-handed alpha
Helix 50
AF5
A
910 920Right-handed alpha
Helix 51
AF6
A
923 946Right-handed alpha
Helix 52
AF7
A
958 974Right-handed alpha
Helix 53
AF8
A
977 996Right-handed alpha
Helix 54
AF9
A
1003 1018Right-handed alpha
Helix 55
AG1
A
1022 1043Right-handed alpha
Helix 56
AG2
A
1055 1068Right-handed alpha
Helix 57
AG3
A
1071 1086Right-handed alpha
Helix 58
AG4
A
1095 1116Right-handed alpha
Helix 59
AG5
A
1122 1139Right-handed alpha
Helix 60
AG6
A
1165 1176Right-handed alpha
Helix 61
AG7
A
1180 1195Right-handed alpha
Helix 62
AG8
A
1203 1216Right-handed alpha
Helix 63
AG9
A
1218 1223Right-handed alpha
Helix 64
AH1
A
1242 1246Right-handed 310
Helix 65
AH2
A
1250 1267Right-handed alpha
Helix 66
AH3
A
1267 1273Right-handed alpha
Helix 67
AH4
A
1277 1283Right-handed alpha
Helix 68
AH5
A
1289 1301Right-handed alpha
Helix 69
AH6
A
1324 1350Right-handed alpha
Helix 70
AH7
A
1356 1360Right-handed 310
Helix 71
AH8
A
1365 1377Right-handed alpha
Helix 72
AH9
A
1390 1407Right-handed alpha
Helix 73
AI1
A
1412 1423Right-handed alpha
Helix 74
AI2
A
1424 1432Right-handed alpha
Helix 75
AI3
A
1446 1462Right-handed alpha
Helix 76
AI4
A
1463 1468Right-handed alpha
Helix 77
AI5
A
1477 1490Right-handed alpha
Helix 78
AI6
A
1504 1522Right-handed alpha
Helix 79
AI7
A
1524 1533Right-handed alpha
Helix 80
AI8
A
1556 1563Right-handed alpha
Helix 81
AI9
A
1565 1574Right-handed alpha
Helix 82
AJ1
A
1574 1584Right-handed alpha
Helix 83
AJ2
A
1589 1607Right-handed alpha
Helix 84
AJ3
A
1612 1625Right-handed alpha
Helix 85
AJ4
A
1626 1629Right-handed 310
Helix 86
AJ5
A
1638 1656Right-handed alpha
Helix 87
AJ6
A
1667 1681Right-handed alpha
Helix 88
AJ7
A
1685 1694Right-handed alpha
Helix 89
AJ8
A
1695 1699Right-handed 310
Helix 90
AJ9
A
1706 1719Right-handed alpha
Helix 91
AK1
A
1733 1753Right-handed alpha
Helix 92
AK2
A
1755 1767Right-handed alpha
Helix 93
AK3
A
1774 1787Right-handed alpha
Helix 94
AK4
A
1790 1807Right-handed alpha
Helix 95
AK5
A
1812 1831Right-handed alpha
Helix 96
AK6
A
1836 1852Right-handed alpha
Helix 97
AK7
A
1859 1883Right-handed alpha
Helix 98
AK8
A
1886 1891Right-handed alpha
Helix 99
AK9
A
1895 1900Right-handed alpha
Helix 100
AL1
A
1908 1924Right-handed alpha
Helix 101
AL2
A
1933 1953Right-handed alpha
Helix 102
AL3
A
1961 1966Right-handed alpha
Helix 103
AL4
A
1970 1974Right-handed 310
Helix 104
AL5
A
1977 1982Right-handed alpha
Helix 105
AL6
A
2035 2048Right-handed alpha
Helix 106
AL7
A
2093 2106Right-handed alpha
Helix 107
AL8
A
2124 2134Right-handed alpha
Helix 108
AL9
A
2139 2153Right-handed alpha
Helix 109
AM1
A
2153 2158Right-handed alpha
Helix 110
AM2
A
2159 2164Right-handed 310
Helix 111
AM3
A
2165 2174Right-handed alpha
Helix 112
AM4
A
2184 2196Right-handed alpha
Helix 113
AM5
A
2205 2222Right-handed alpha
Helix 114
AM6
A
2227 2245Right-handed alpha
Helix 115
AM7
A
2255 2261Right-handed alpha
Helix 116
AM8
A
2270 2283Right-handed alpha
Helix 117
AM9
A
2295 2306Right-handed alpha
Helix 118
AN1
A
2307 2309Right-handed 310
Helix 119
AN2
A
2312 2333Right-handed alpha
Helix 120
AN3
A
2337 2354Right-handed alpha
Helix 121
AN4
A
2356 2371Right-handed alpha
Helix 122
AN5
A
2374 2386Right-handed alpha
Helix 123
AN6
A
2387 2389Right-handed 310
Helix 124
AN7
A
2391 2404Right-handed alpha
Helix 125
AN8
A
2411 2418Right-handed alpha
Helix 126
AN9
A
2419 2426Right-handed alpha
Helix 127
AO1
A
2428 2443Right-handed alpha
Helix 128
AO2
A
2444 2446Right-handed 310
Helix 129
AO3
A
2447 2460Right-handed alpha
Helix 130
AO4
A
2466 2482Right-handed alpha
Helix 131
AO5
A
2494 2509Right-handed alpha
Helix 132
AO6
A
2510 2512Right-handed 310
Helix 133
AO7
A
2516 2527Right-handed alpha
Helix 134
AO8
A
2534 2544Right-handed alpha
Helix 135
AO9
A
2545 2546Right-handed 310
Helix 136
AP1
A
2547 2549Right-handed 310
Helix 137
AP2
A
2550 2564Right-handed alpha
Helix 138
AP3
A
2735 2767Right-handed alpha
Helix 139
AP4
A
2787 2799Right-handed alpha
Helix 140
AP5
A
2801 2820Right-handed alpha
Helix 141
AP6
A
2825 2847Right-handed alpha
Helix 142
AP7
A
2851 2864Right-handed alpha
Helix 143
AP8
A
2865 2869Right-handed 310
Helix 144
AP9
A
2872 2883Right-handed alpha
Helix 145
AQ1
A
2885 2898Right-handed alpha
Helix 146
AQ2
A
2919 2934Right-handed alpha
Helix 147
AQ3
A
2944 2948Right-handed 310
Helix 148
AQ4
A
2950 2962Right-handed alpha
Helix 149
AQ5
A
2964 2977Right-handed alpha
Helix 150
AQ6
A
2987 3005Right-handed alpha
Helix 151
AQ7
A
3007 3017Right-handed alpha
Helix 152
AQ8
A
3033 3037Right-handed 310
Helix 153
AQ9
A
3040 3054Right-handed alpha
Helix 154
AR1
A
3060 3069Right-handed alpha
Helix 155
AR2
A
3072 3082Right-handed alpha
Helix 156
AR3
A
3084 3093Right-handed alpha
Helix 157
AR4
A
3095 3116Right-handed alpha
Helix 158
AR5
A
3124 3130Right-handed alpha
Helix 159
AR6
A
3131 3147Right-handed alpha
Helix 160
AR7
A
3154 3166Right-handed alpha
Helix 161
AR8
A
3175 3196Right-handed alpha
Helix 162
AR9
A
3227 3249Right-handed alpha
Helix 163
AS1
A
3251 3261Right-handed alpha
Helix 164
AS2
A
3269 3289Right-handed alpha
Helix 165
AS3
A
3295 3308Right-handed alpha
Helix 166
AS4
A
3319 3344Right-handed alpha
Helix 167
AS5
A
3346 3351Right-handed alpha
Helix 168
AS6
A
3355 3361Right-handed alpha
Helix 169
AS7
A
3371 3394Right-handed alpha
Helix 170
AS8
A
3409 3429Right-handed alpha
Helix 171
AS9
A
3433 3440Right-handed alpha
Helix 172
AT1
A
3441 3456Right-handed alpha
Helix 173
AT2
A
3458 3463Right-handed alpha
Helix 174
AT3
A
3466 3474Right-handed alpha
Helix 175
AT4
A
3480 3489Right-handed alpha
Helix 176
AT5
A
3490 3497Right-handed 310
Helix 177
AT6
A
3498 3503Right-handed alpha
Helix 178
AT7
A
3514 3525Right-handed alpha
Helix 179
AT8
A
3529 3539Right-handed alpha
Helix 180
AT9
A
3547 3562Right-handed alpha
Helix 181
AU1
A
3566 3577Right-handed alpha
Helix 182
AU2
A
3580 3594Right-handed alpha
Helix 183
AU3
A
3604 3616Right-handed alpha
Helix 184
AU4
A
3620 3627Right-handed alpha
Helix 185
AU5
A
3632 3640Right-handed alpha
Helix 186
AU6
A
3641 3650Right-handed alpha
Helix 187
AU7
A
3651 3654Right-handed 310
Helix 188
AU8
A
3660 3673Right-handed alpha
Helix 189
AU9
A
3680 3684Right-handed 310
Helix 190
AV1
A
3758 3775Right-handed alpha
Helix 191
AV2
A
3778 3784Right-handed alpha
Helix 192
AV3
A
3812 3820Right-handed alpha
Helix 193
AV4
A
3821 3830Right-handed alpha
Helix 194
AV5
A
3834 3848Right-handed alpha
Helix 195
AV6
A
3853 3861Right-handed alpha
Helix 196
AV7
A
3863 3876Right-handed alpha
Helix 197
AV8
A
3881 3890Right-handed alpha
Helix 198
AV9
A
3893 3918Right-handed alpha
Helix 199
AW1
A
3964 3971Right-handed alpha
Helix 200
AW2
A
3978 3993Right-handed alpha
Helix 201
AW3
A
3995 4002Right-handed alpha
Helix 202
AW4
A
4003 4008Right-handed alpha
Helix 203
AW5
A
4039 4050Right-handed alpha
Helix 204
AW6
A
4055 4069Right-handed alpha
Helix 205
AW7
A
4073 4083Right-handed alpha
Helix 206
AW8
A
4088 4093Right-handed 310
Helix 207
AW9
A
4099 4112Right-handed alpha
Helix 208
AX1
A
4113 4118Right-handed alpha
Helix 209
AX2
A
4121 4125Right-handed 310
Helix 210
AX3
B
58 78Right-handed alpha
Helix 211
AX4
B
112 121Right-handed alpha
Helix 212
AX5
B
123 135Right-handed alpha
Helix 213
AX6
B
144 156Right-handed alpha
Helix 214
AX7
B
179 196Right-handed alpha
Helix 215
AX8
B
239 244Right-handed alpha
Helix 216
AX9
B
330 337Right-handed alpha
Helix 217
AY1
B
377 393Right-handed alpha
Helix 218
AY2
B
457 470Right-handed alpha
Helix 219
AY3
B
480 496Right-handed alpha
Helix 220
AY4
B
510 519Right-handed alpha
Helix 221
AY5
B
521 527Right-handed alpha
Helix 222
AY6
C
29 49Right-handed alpha
Helix 223
AY7
C
87 96Right-handed alpha
Helix 224
AY8
C
107 122Right-handed alpha
Helix 225
AY9
C
147 158Right-handed alpha
Helix 226
AZ1
C
198 217Right-handed alpha
Helix 227
AZ2
C
217 223Right-handed alpha
Helix 228
AZ3
C
227 233Right-handed alpha
Helix 229
AZ4
C
306 308Right-handed 310
Helix 230
AZ5
C
325 332Right-handed alpha
Helix 231
AZ6
C
352 356Right-handed 310
Helix 232
AZ7
C
371 386Right-handed alpha
Helix 233
AZ8
C
447 461Right-handed alpha
Helix 234
AZ9
C
484 500Right-handed alpha
Helix 235
BA1
C
509 516Right-handed alpha
Helix 236
BA2
C
519 537Right-handed alpha
Helix 237
BA3
C
549 554Right-handed alpha
Helix 238
BA4
C
596 605Right-handed alpha
Helix 239
BA5
C
612 626Right-handed alpha
Helix 240
BA6
C
628 649Right-handed alpha
Helix 241
BA7
C
651 669Right-handed alpha
Helix 242
BA8
C
672 682Right-handed alpha
Helix 243
BA9
C
699 705Right-handed alpha
Helix 244
BB1
C
725 731Right-handed alpha
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There are 12 sheets in PDB entry 7Z87. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
893 895first strand
Strand 2
A
904 906anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3719 3722first strand
Strand 2
A
3739 3742anti-parallel
Strand 3
A
3747 3753anti-parallel
Strand 4
A
3800 3804anti-parallel
Strand 5
A
3793 3797anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3727 3728first strand
Strand 2
A
3736 3737anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3928 3931anti-parallel
Strand 3
A
3937 3939anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
102 109first strand
Strand 2
B
82 88anti-parallel
Strand 3
B
35 43parallel
Strand 4
B
161 170parallel
Strand 5
B
198 204parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
258 262first strand
Strand 2
B
268 274anti-parallel
Strand 3
B
366 370anti-parallel
Strand 4
B
431 436anti-parallel
Strand 5
B
409 416anti-parallel
Strand 6
B
394 401anti-parallel
Strand 7
B
344 352anti-parallel
Strand 8
B
258 262parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
286 289first strand
Strand 2
C
310 316anti-parallel
Strand 3
C
319 321anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
298 303first strand
Strand 2
C
290 295anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
325 329first strand
Strand 2
B
316 322anti-parallel
Strand 3
C
277 280anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
77 79first strand
Strand 2
C
52 59anti-parallel
Strand 3
C
8 15parallel
Strand 4
C
130 135parallel
Strand 5
C
160 165parallel
Strand 6
C
224 226parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
246 253first strand
Strand 2
C
257 268anti-parallel
Strand 3
C
360 364anti-parallel
Strand 4
C
419 423anti-parallel
Strand 5
C
404 409anti-parallel
Strand 6
C
390 396anti-parallel
Strand 7
C
339 346anti-parallel
Strand 8
C
246 253parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
464 466first strand
Strand 2
C
473 475anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il