Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z88


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z88 entry

There are 5 chains in PDB entry 7Z88 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7MET 4128
B
 LYS 31TYR 534
C
 ASN 6ILE 732
D
 C 1 T 26
E
 A 18 G 43
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are229 helices in PDB entry 7Z88. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 18Right-handed alpha
Helix 2
AA2
A
25 45Right-handed alpha
Helix 3
AA3
A
47 59Right-handed alpha
Helix 4
AA4
A
64 72Right-handed alpha
Helix 5
AA5
A
79 96Right-handed alpha
Helix 6
AA6
A
100 117Right-handed alpha
Helix 7
AA7
A
120 125Right-handed alpha
Helix 8
AA8
A
125 138Right-handed alpha
Helix 9
AA9
A
148 159Right-handed alpha
Helix 10
AB1
A
169 184Right-handed alpha
Helix 11
AB2
A
192 209Right-handed alpha
Helix 12
AB3
A
216 232Right-handed alpha
Helix 13
AB4
A
243 257Right-handed alpha
Helix 14
AB5
A
266 279Right-handed alpha
Helix 15
AB6
A
280 282Right-handed 310
Helix 16
AB7
A
283 288Right-handed 310
Helix 17
AB8
A
289 302Right-handed alpha
Helix 18
AB9
A
307 328Right-handed alpha
Helix 19
AC1
A
334 351Right-handed alpha
Helix 20
AC2
A
358 374Right-handed alpha
Helix 21
AC3
A
379 384Right-handed alpha
Helix 22
AC4
A
386 397Right-handed alpha
Helix 23
AC5
A
409 423Right-handed alpha
Helix 24
AC6
A
431 445Right-handed alpha
Helix 25
AC7
A
453 469Right-handed alpha
Helix 26
AC8
A
472 491Right-handed alpha
Helix 27
AC9
A
527 536Right-handed alpha
Helix 28
AD1
A
560 578Right-handed alpha
Helix 29
AD2
A
616 634Right-handed alpha
Helix 30
AD3
A
645 660Right-handed alpha
Helix 31
AD4
A
665 680Right-handed alpha
Helix 32
AD5
A
701 718Right-handed alpha
Helix 33
AD6
A
719 721Right-handed 310
Helix 34
AD7
A
722 734Right-handed alpha
Helix 35
AD8
A
744 748Right-handed 310
Helix 36
AD9
A
749 758Right-handed alpha
Helix 37
AE1
A
762 779Right-handed alpha
Helix 38
AE2
A
816 824Right-handed alpha
Helix 39
AE3
A
828 837Right-handed alpha
Helix 40
AE4
A
847 862Right-handed alpha
Helix 41
AE5
A
866 871Right-handed 310
Helix 42
AE6
A
910 920Right-handed alpha
Helix 43
AE7
A
923 945Right-handed alpha
Helix 44
AE8
A
958 974Right-handed alpha
Helix 45
AE9
A
978 983Right-handed alpha
Helix 46
AF1
A
984 996Right-handed alpha
Helix 47
AF2
A
997 1001Right-handed 310
Helix 48
AF3
A
1003 1018Right-handed alpha
Helix 49
AF4
A
1022 1044Right-handed alpha
Helix 50
AF5
A
1055 1068Right-handed alpha
Helix 51
AF6
A
1074 1086Right-handed alpha
Helix 52
AF7
A
1101 1103Right-handed 310
Helix 53
AF8
A
1104 1114Right-handed alpha
Helix 54
AF9
A
1118 1121Right-handed 310
Helix 55
AG1
A
1122 1145Right-handed alpha
Helix 56
AG2
A
1165 1175Right-handed alpha
Helix 57
AG3
A
1180 1195Right-handed alpha
Helix 58
AG4
A
1203 1215Right-handed alpha
Helix 59
AG5
A
1217 1226Right-handed alpha
Helix 60
AG6
A
1250 1272Right-handed alpha
Helix 61
AG7
A
1277 1282Right-handed alpha
Helix 62
AG8
A
1283 1287Right-handed 310
Helix 63
AG9
A
1289 1300Right-handed alpha
Helix 64
AH1
A
1325 1350Right-handed alpha
Helix 65
AH2
A
1355 1359Right-handed 310
Helix 66
AH3
A
1367 1377Right-handed alpha
Helix 67
AH4
A
1378 1383Right-handed 310
Helix 68
AH5
A
1389 1409Right-handed alpha
Helix 69
AH6
A
1412 1423Right-handed alpha
Helix 70
AH7
A
1424 1432Right-handed alpha
Helix 71
AH8
A
1440 1461Right-handed alpha
Helix 72
AH9
A
1477 1491Right-handed alpha
Helix 73
AI1
A
1505 1521Right-handed alpha
Helix 74
AI2
A
1524 1534Right-handed alpha
Helix 75
AI3
A
1556 1564Right-handed alpha
Helix 76
AI4
A
1565 1572Right-handed alpha
Helix 77
AI5
A
1577 1585Right-handed alpha
Helix 78
AI6
A
1589 1607Right-handed alpha
Helix 79
AI7
A
1613 1625Right-handed alpha
Helix 80
AI8
A
1640 1656Right-handed alpha
Helix 81
AI9
A
1667 1679Right-handed alpha
Helix 82
AJ1
A
1685 1693Right-handed alpha
Helix 83
AJ2
A
1695 1700Right-handed alpha
Helix 84
AJ3
A
1703 1722Right-handed alpha
Helix 85
AJ4
A
1735 1753Right-handed alpha
Helix 86
AJ5
A
1755 1767Right-handed alpha
Helix 87
AJ6
A
1774 1787Right-handed alpha
Helix 88
AJ7
A
1790 1807Right-handed alpha
Helix 89
AJ8
A
1812 1822Right-handed alpha
Helix 90
AJ9
A
1823 1831Right-handed alpha
Helix 91
AK1
A
1837 1852Right-handed alpha
Helix 92
AK2
A
1859 1884Right-handed alpha
Helix 93
AK3
A
1886 1891Right-handed alpha
Helix 94
AK4
A
1909 1921Right-handed alpha
Helix 95
AK5
A
1933 1953Right-handed alpha
Helix 96
AK6
A
1960 1965Right-handed alpha
Helix 97
AK7
A
1970 1974Right-handed 310
Helix 98
AK8
A
1976 1982Right-handed alpha
Helix 99
AK9
A
2037 2046Right-handed alpha
Helix 100
AL1
A
2093 2106Right-handed alpha
Helix 101
AL2
A
2125 2135Right-handed alpha
Helix 102
AL3
A
2139 2153Right-handed alpha
Helix 103
AL4
A
2154 2158Right-handed 310
Helix 104
AL5
A
2165 2174Right-handed alpha
Helix 105
AL6
A
2182 2196Right-handed alpha
Helix 106
AL7
A
2205 2222Right-handed alpha
Helix 107
AL8
A
2227 2245Right-handed alpha
Helix 108
AL9
A
2255 2261Right-handed alpha
Helix 109
AM1
A
2270 2283Right-handed alpha
Helix 110
AM2
A
2295 2308Right-handed alpha
Helix 111
AM3
A
2312 2333Right-handed alpha
Helix 112
AM4
A
2337 2354Right-handed alpha
Helix 113
AM5
A
2356 2369Right-handed alpha
Helix 114
AM6
A
2378 2386Right-handed alpha
Helix 115
AM7
A
2387 2389Right-handed 310
Helix 116
AM8
A
2391 2403Right-handed alpha
Helix 117
AM9
A
2411 2418Right-handed alpha
Helix 118
AN1
A
2419 2424Right-handed alpha
Helix 119
AN2
A
2428 2442Right-handed alpha
Helix 120
AN3
A
2443 2446Right-handed 310
Helix 121
AN4
A
2447 2460Right-handed alpha
Helix 122
AN5
A
2466 2483Right-handed alpha
Helix 123
AN6
A
2493 2508Right-handed alpha
Helix 124
AN7
A
2516 2527Right-handed alpha
Helix 125
AN8
A
2536 2543Right-handed alpha
Helix 126
AN9
A
2544 2546Right-handed 310
Helix 127
AO1
A
2553 2565Right-handed alpha
Helix 128
AO2
A
2791 2798Right-handed alpha
Helix 129
AO3
A
2801 2820Right-handed alpha
Helix 130
AO4
A
2825 2847Right-handed alpha
Helix 131
AO5
A
2851 2862Right-handed alpha
Helix 132
AO6
A
2866 2870Right-handed 310
Helix 133
AO7
A
2872 2884Right-handed alpha
Helix 134
AO8
A
2885 2897Right-handed alpha
Helix 135
AO9
A
2918 2931Right-handed alpha
Helix 136
AP1
A
2935 2941Right-handed alpha
Helix 137
AP2
A
2951 2962Right-handed alpha
Helix 138
AP3
A
2966 2977Right-handed alpha
Helix 139
AP4
A
2987 3005Right-handed alpha
Helix 140
AP5
A
3007 3018Right-handed alpha
Helix 141
AP6
A
3034 3056Right-handed alpha
Helix 142
AP7
A
3060 3068Right-handed alpha
Helix 143
AP8
A
3072 3082Right-handed alpha
Helix 144
AP9
A
3084 3093Right-handed alpha
Helix 145
AQ1
A
3095 3115Right-handed alpha
Helix 146
AQ2
A
3123 3145Right-handed alpha
Helix 147
AQ3
A
3146 3152Right-handed 310
Helix 148
AQ4
A
3154 3167Right-handed alpha
Helix 149
AQ5
A
3175 3196Right-handed alpha
Helix 150
AQ6
A
3227 3249Right-handed alpha
Helix 151
AQ7
A
3251 3264Right-handed alpha
Helix 152
AQ8
A
3269 3288Right-handed alpha
Helix 153
AQ9
A
3292 3302Right-handed alpha
Helix 154
AR1
A
3304 3309Right-handed alpha
Helix 155
AR2
A
3319 3342Right-handed alpha
Helix 156
AR3
A
3354 3362Right-handed alpha
Helix 157
AR4
A
3372 3391Right-handed alpha
Helix 158
AR5
A
3407 3428Right-handed alpha
Helix 159
AR6
A
3441 3455Right-handed alpha
Helix 160
AR7
A
3459 3463Right-handed 310
Helix 161
AR8
A
3464 3475Right-handed alpha
Helix 162
AR9
A
3480 3489Right-handed alpha
Helix 163
AS1
A
3495 3497Right-handed 310
Helix 164
AS2
A
3498 3506Right-handed alpha
Helix 165
AS3
A
3510 3514Right-handed 310
Helix 166
AS4
A
3515 3525Right-handed alpha
Helix 167
AS5
A
3535 3540Right-handed alpha
Helix 168
AS6
A
3547 3563Right-handed alpha
Helix 169
AS7
A
3567 3579Right-handed alpha
Helix 170
AS8
A
3580 3596Right-handed alpha
Helix 171
AS9
A
3604 3615Right-handed alpha
Helix 172
AT1
A
3620 3627Right-handed alpha
Helix 173
AT2
A
3630 3637Right-handed alpha
Helix 174
AT3
A
3641 3650Right-handed alpha
Helix 175
AT4
A
3660 3674Right-handed alpha
Helix 176
AT5
A
3680 3683Right-handed 310
Helix 177
AT6
A
3684 3689Right-handed alpha
Helix 178
AT7
A
3758 3778Right-handed alpha
Helix 179
AT8
A
3778 3784Right-handed alpha
Helix 180
AT9
A
3812 3820Right-handed alpha
Helix 181
AU1
A
3821 3830Right-handed alpha
Helix 182
AU2
A
3834 3848Right-handed alpha
Helix 183
AU3
A
3853 3859Right-handed alpha
Helix 184
AU4
A
3863 3878Right-handed alpha
Helix 185
AU5
A
3882 3890Right-handed alpha
Helix 186
AU6
A
3893 3918Right-handed alpha
Helix 187
AU7
A
3924 3926Right-handed 310
Helix 188
AU8
A
3964 3972Right-handed alpha
Helix 189
AU9
A
3981 3992Right-handed alpha
Helix 190
AV1
A
3996 4007Right-handed alpha
Helix 191
AV2
A
4040 4050Right-handed alpha
Helix 192
AV3
A
4055 4068Right-handed alpha
Helix 193
AV4
A
4073 4083Right-handed alpha
Helix 194
AV5
A
4099 4112Right-handed alpha
Helix 195
AV6
A
4113 4118Right-handed alpha
Helix 196
AV7
A
4121 4125Right-handed 310
Helix 197
AV8
B
58 78Right-handed alpha
Helix 198
AV9
B
112 121Right-handed alpha
Helix 199
AW1
B
123 135Right-handed alpha
Helix 200
AW2
B
144 156Right-handed alpha
Helix 201
AW3
B
180 196Right-handed alpha
Helix 202
AW4
B
312 316Right-handed 310
Helix 203
AW5
B
330 338Right-handed alpha
Helix 204
AW6
B
377 392Right-handed alpha
Helix 205
AW7
B
457 470Right-handed alpha
Helix 206
AW8
B
480 495Right-handed alpha
Helix 207
AW9
B
510 519Right-handed alpha
Helix 208
AX1
B
521 530Right-handed alpha
Helix 209
AX2
C
29 48Right-handed alpha
Helix 210
AX3
C
87 96Right-handed alpha
Helix 211
AX4
C
107 122Right-handed alpha
Helix 212
AX5
C
147 157Right-handed alpha
Helix 213
AX6
C
198 216Right-handed alpha
Helix 214
AX7
C
217 223Right-handed alpha
Helix 215
AX8
C
306 308Right-handed 310
Helix 216
AX9
C
325 331Right-handed alpha
Helix 217
AY1
C
352 356Right-handed 310
Helix 218
AY2
C
371 387Right-handed alpha
Helix 219
AY3
C
447 461Right-handed alpha
Helix 220
AY4
C
484 500Right-handed alpha
Helix 221
AY5
C
509 516Right-handed alpha
Helix 222
AY6
C
519 537Right-handed alpha
Helix 223
AY7
C
549 553Right-handed 310
Helix 224
AY8
C
596 605Right-handed alpha
Helix 225
AY9
C
610 626Right-handed alpha
Helix 226
AZ1
C
628 649Right-handed alpha
Helix 227
AZ2
C
652 669Right-handed alpha
Helix 228
AZ3
C
671 682Right-handed alpha
Helix 229
AZ4
C
699 705Right-handed alpha
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There are 11 sheets in PDB entry 7Z88. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 895first strand
Strand 2
A
904 906anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3736 3738first strand
Strand 2
A
3750 3754anti-parallel
Strand 3
A
3800 3804anti-parallel
Strand 4
A
3793 3797anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3928 3931anti-parallel
Strand 3
A
3937 3939anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
82 88anti-parallel
Strand 3
B
37 43parallel
Strand 4
B
164 169parallel
Strand 5
B
198 201parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 370first strand
Strand 2
B
268 274anti-parallel
Strand 3
B
258 262anti-parallel
Strand 4
B
345 352parallel
Strand 5
B
394 400anti-parallel
Strand 6
B
409 413anti-parallel
Strand 7
B
434 436anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 289first strand
Strand 2
C
310 312anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 303first strand
Strand 2
C
290 296anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 329first strand
Strand 2
B
318 322anti-parallel
Strand 3
C
277 278anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
53 59anti-parallel
Strand 3
C
8 15parallel
Strand 4
C
129 135parallel
Strand 5
C
162 164parallel
Strand 6
C
224 225parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
340 341first strand
Strand 2
C
246 253parallel
Strand 3
C
257 268anti-parallel
Strand 4
C
360 366anti-parallel
Strand 5
C
419 423anti-parallel
Strand 6
C
404 407anti-parallel
Strand 7
C
392 395anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
315 316first strand
Strand 2
C
319 320anti-parallel
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