Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z8E entry

There are 3 chains in PDB entry 7Z8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0LYS 589
B
 GLY 2ALA 6
D
 SER 1SER 2
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7Z8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 66Right-handed alpha
Helix 2
AA2
A
115 130Right-handed alpha
Helix 3
AA3
A
130 137Right-handed alpha
Helix 4
AA4
A
162 167Right-handed alpha
Helix 5
AA5
A
168 170Right-handed 310
Helix 6
AA6
A
174 179Right-handed alpha
Helix 7
AA7
A
228 232Right-handed 310
Helix 8
AA8
A
247 257Right-handed alpha
Helix 9
AA9
A
267 274Right-handed alpha
Helix 10
AB1
A
277 282Right-handed alpha
Helix 11
AB2
A
291 295Right-handed 310
Helix 12
AB3
A
309 313Right-handed 310
Helix 13
AB4
A
314 325Right-handed alpha
Helix 14
AB5
A
326 334Right-handed alpha
Helix 15
AB6
A
358 367Right-handed alpha
Helix 16
AB7
A
368 373Right-handed 310
Helix 17
AB8
A
374 379Right-handed alpha
Helix 18
AB9
A
388 406Right-handed alpha
Helix 19
AC1
A
432 434Right-handed 310
Helix 20
AC2
A
435 449Right-handed alpha
Helix 21
AC3
A
459 469Right-handed alpha
Helix 22
AC4
A
486 488Right-handed 310
Helix 23
AC5
A
489 494Right-handed alpha
Helix 24
AC6
A
495 498Right-handed 310
Helix 25
AC7
A
511 523Right-handed alpha
Helix 26
AC8
A
526 544Right-handed alpha
Helix 27
AC9
A
584 588Right-handed alpha
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There are 8 sheets in PDB entry 7Z8E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
97 102anti-parallel
Strand 4
A
150 155anti-parallel
Strand 5
A
140 145anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
81 83anti-parallel
Strand 3
A
71 73anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 43first strand
Strand 2
A
239 245parallel
Strand 3
A
214 219anti-parallel
Strand 4
A
204 210anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 265first strand
Strand 2
A
556 561anti-parallel
Strand 3
A
285 290anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 457first strand
Strand 2
A
425 430parallel
Strand 3
A
474 481parallel
Strand 4
A
298 305anti-parallel
Strand 5
A
548 549anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
A
551 552anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 411first strand
Strand 2
A
414 417anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 565first strand
Strand 2
A
582 583anti-parallel
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